Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 8:4290589-4641007

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41 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Elavl1 8 4285382 to 4325413 40031 - protein coding gene ELAV (embryonic lethal, abnormal vision)-like 1 (Hu antigen R)
Tssr80274 8 4295534 to 4295554 20 - TSS region transcription start site region 80274
Cpgi20054 8 4324415 to 4325789 1374 CpG island CpG island 20054
Tssr80275 8 4324970 to 4324985 15 - TSS region transcription start site region 80275
Tssr80276 8 4324999 to 4325091 92 - TSS region transcription start site region 80276
Tssr80277 8 4325096 to 4325110 14 - TSS region transcription start site region 80277
Tssr76119 8 4325205 to 4325263 58 + TSS region transcription start site region 76119
Ccl25 8 4325210 to 4360020 34810 + protein coding gene chemokine (C-C motif) ligand 25
Tssr80278 8 4325320 to 4325328 8 - TSS region transcription start site region 80278
Tssr76120 8 4349596 to 4349611 15 + TSS region transcription start site region 76120
Tssr76121 8 4354144 to 4354155 11 + TSS region transcription start site region 76121
Tssr76122 8 4359734 to 4359756 22 + TSS region transcription start site region 76122
Gm44869 8 4362298 to 4362654 356 - pseudogene predicted gene 44869
Gm45118 8 4368596 to 4402845 34249 - pseudogene predicted gene 45118
Tssr76123 8 4391673 to 4391675 2 + TSS region transcription start site region 76123
Gm7434 8 4391726 to 4392133 407 + pseudogene predicted gene 7434
Gm45117 8 4399238 to 4401011 1773 + unclassified gene predicted gene 45117
Tssr2482 8 4419355 to 4419357 2 + TSS region transcription start site region 2482
Gm6070 8 4465589 to 4466007 418 + pseudogene predicted gene 6070
Tssr2483 8 4477717 to 4477736 19 + TSS region transcription start site region 2483
Cers4 8 4492979 to 4529603 36624 + protein coding gene ceramide synthase 4
Tssr76124 8 4493022 to 4493045 23 + TSS region transcription start site region 76124
Cpgi20055 8 4493288 to 4494057 769 CpG island CpG island 20055
Tssr76125 8 4493420 to 4493435 15 + TSS region transcription start site region 76125
Tssr76126 8 4493443 to 4493472 29 + TSS region transcription start site region 76126
Tssr76127 8 4493475 to 4493491 16 + TSS region transcription start site region 76127
Tssr76128 8 4493496 to 4493511 15 + TSS region transcription start site region 76128
Gm36956 8 4521912 to 4522125 213 - unclassified gene predicted gene, 36956
Tssr76129 8 4522112 to 4522124 12 + TSS region transcription start site region 76129
Tssr76130 8 4524622 to 4524635 13 + TSS region transcription start site region 76130
Tssr76131 8 4524716 to 4524729 13 + TSS region transcription start site region 76131
Tssr76132 8 4524792 to 4524807 15 + TSS region transcription start site region 76132
Tssr76133 8 4524897 to 4524912 15 + TSS region transcription start site region 76133
A830058I18Rik 8 4527035 to 4529607 2572 unclassified gene RIKEN cDNA A830058I18 gene
Vmn2r-ps89 8 4529618 to 4538187 8569 - pseudogene vomeronasal 2, receptor, pseudogene 89
Cpgi20056 8 4612987 to 4613342 355 CpG island CpG island 20056
Tssr76134 8 4613131 to 4613142 11 + TSS region transcription start site region 76134
Tssr76135 8 4613152 to 4613177 25 + TSS region transcription start site region 76135
Zfp958 8 4613167 to 4630231 17064 + protein coding gene zinc finger protein 958
Tssr76136 8 4613182 to 4613207 25 + TSS region transcription start site region 76136
Tssr76137 8 4613211 to 4613224 13 + TSS region transcription start site region 76137