Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 8:4271673-4511675

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33 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Timm44 8 4259731 to 4275905 16174 - protein coding gene translocase of inner mitochondrial membrane 44
Gm26102 8 4274853 to 4275136 283 + unclassified non-coding RNA gene predicted gene, 26102
Cpgi20053 8 4275529 to 4276265 736 CpG island CpG island 20053
Tssr80271 8 4275886 to 4275915 29 - TSS region transcription start site region 80271
Elavl1 8 4285382 to 4325413 40031 - protein coding gene ELAV (embryonic lethal, abnormal vision)-like 1 (Hu antigen R)
Tssr80272 8 4289536 to 4289541 5 - TSS region transcription start site region 80272
Tssr80273 8 4289595 to 4289652 57 - TSS region transcription start site region 80273
Tssr80274 8 4295534 to 4295554 20 - TSS region transcription start site region 80274
Cpgi20054 8 4324415 to 4325789 1374 CpG island CpG island 20054
Tssr80275 8 4324970 to 4324985 15 - TSS region transcription start site region 80275
Tssr80276 8 4324999 to 4325091 92 - TSS region transcription start site region 80276
Tssr80277 8 4325096 to 4325110 14 - TSS region transcription start site region 80277
Tssr76119 8 4325205 to 4325263 58 + TSS region transcription start site region 76119
Ccl25 8 4325210 to 4360020 34810 + protein coding gene chemokine (C-C motif) ligand 25
Tssr80278 8 4325320 to 4325328 8 - TSS region transcription start site region 80278
Tssr76120 8 4349596 to 4349611 15 + TSS region transcription start site region 76120
Tssr76121 8 4354144 to 4354155 11 + TSS region transcription start site region 76121
Tssr76122 8 4359734 to 4359756 22 + TSS region transcription start site region 76122
Gm44869 8 4362298 to 4362654 356 - pseudogene predicted gene 44869
Gm45118 8 4368596 to 4402845 34249 - pseudogene predicted gene 45118
Tssr76123 8 4391673 to 4391675 2 + TSS region transcription start site region 76123
Gm7434 8 4391726 to 4392133 407 + pseudogene predicted gene 7434
Gm45117 8 4399238 to 4401011 1773 + unclassified gene predicted gene 45117
Tssr2482 8 4419355 to 4419357 2 + TSS region transcription start site region 2482
Gm6070 8 4465589 to 4466007 418 + pseudogene predicted gene 6070
Tssr2483 8 4477717 to 4477736 19 + TSS region transcription start site region 2483
Cers4 8 4492979 to 4529603 36624 + protein coding gene ceramide synthase 4
Tssr76124 8 4493022 to 4493045 23 + TSS region transcription start site region 76124
Cpgi20055 8 4493288 to 4494057 769 CpG island CpG island 20055
Tssr76125 8 4493420 to 4493435 15 + TSS region transcription start site region 76125
Tssr76126 8 4493443 to 4493472 29 + TSS region transcription start site region 76126
Tssr76127 8 4493475 to 4493491 16 + TSS region transcription start site region 76127
Tssr76128 8 4493496 to 4493511 15 + TSS region transcription start site region 76128