Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 8:42255309-45098335

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110 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Mnif1 8 34642776 to 44852835 10210059 QTL macronutrient intake, fat 1
Gm23531 8 42522136 to 42522203 67 - snoRNA gene predicted gene, 23531
Gm26181 8 42742807 to 42742912 105 + snRNA gene predicted gene, 26181
Gm18414 8 42769434 to 42770127 693 + pseudogene predicted gene, 18414
D8Mit65 8 42935298 to 42935531 233 DNA segment DNA segment, Chr 8, Massachusetts Institute of Technology 65
D8Dcr12 8 43072866 to 43072961 95 DNA segment DNA Segment, Chr 8, Derry C. Roopenian 12
Gm45590 8 43085587 to 43085848 261 + pseudogene predicted gene 45590
Triml1 8 43129807 to 43141486 11679 - protein coding gene tripartite motif family-like 1
Obq30 8 43130285 to 43130285 0 QTL obesity QTL 30
Tssr81118 8 43141476 to 43141483 7 - TSS region transcription start site region 81118
Tssr81119 8 43141486 to 43141506 20 - TSS region transcription start site region 81119
Tssr81120 8 43141509 to 43141530 21 - TSS region transcription start site region 81120
Tssr81121 8 43143024 to 43143043 19 - TSS region transcription start site region 81121
Tssr81122 8 43143046 to 43143062 16 - TSS region transcription start site region 81122
Gm6284 8 43158757 to 43163946 5189 + pseudogene predicted gene 6284
Tssr81123 8 43180253 to 43180258 5 - TSS region transcription start site region 81123
Tssr81124 8 43180266 to 43180281 15 - TSS region transcription start site region 81124
Tssr81125 8 43180282 to 43180301 19 - TSS region transcription start site region 81125
Tssr81126 8 43180302 to 43180322 20 - TSS region transcription start site region 81126
Tssr77103 8 43180454 to 43180461 7 + TSS region transcription start site region 77103
Tssr77104 8 43180470 to 43180479 9 + TSS region transcription start site region 77104
Tssr77105 8 43180517 to 43180524 7 + TSS region transcription start site region 77105
Tssr77106 8 43180529 to 43180546 17 + TSS region transcription start site region 77106
Triml2 8 43180541 to 43193881 13340 + protein coding gene tripartite motif family-like 2
Gm2221 8 43199968 to 43200385 417 + pseudogene predicted gene 2221
Zfp42 8 43295063 to 43306980 11917 - protein coding gene zinc finger protein 42
Cpgi20289 8 43295810 to 43296020 210 CpG island CpG island 20289
Tssr81127 8 43304673 to 43304676 3 - TSS region transcription start site region 81127
Tssr81128 8 43305836 to 43305849 13 - TSS region transcription start site region 81128
Tssr81129 8 43305870 to 43305880 10 - TSS region transcription start site region 81129
Tssr81130 8 43305898 to 43305910 12 - TSS region transcription start site region 81130
Tssr81131 8 43305920 to 43305926 6 - TSS region transcription start site region 81131
Tssr81132 8 43306345 to 43306351 6 - TSS region transcription start site region 81132
Tssr81133 8 43306690 to 43306701 11 - TSS region transcription start site region 81133
Tssr81134 8 43306723 to 43306744 21 - TSS region transcription start site region 81134
Tssr81135 8 43306956 to 43306965 9 - TSS region transcription start site region 81135
Tssr81136 8 43306991 to 43307009 18 - TSS region transcription start site region 81136
Tssr81137 8 43307020 to 43307035 15 - TSS region transcription start site region 81137
Tssr81138 8 43307042 to 43307047 5 - TSS region transcription start site region 81138
Tssr81139 8 43307050 to 43307058 8 - TSS region transcription start site region 81139
Tssr77107 8 43307227 to 43307241 14 + TSS region transcription start site region 77107
Tssr81140 8 43308412 to 43308423 11 - TSS region transcription start site region 81140
Tssr77108 8 43308441 to 43308466 25 + TSS region transcription start site region 77108
Gm40498 8 43312626 to 43316640 4014 - protein coding gene predicted gene, 40498
Tssr81141 8 43320551 to 43320560 9 - TSS region transcription start site region 81141
Tssr81142 8 43320594 to 43320605 11 - TSS region transcription start site region 81142
Tssr81143 8 43320748 to 43320760 12 - TSS region transcription start site region 81143
Tssr77109 8 43321204 to 43321223 19 + TSS region transcription start site region 77109
Gm22986 8 43377975 to 43378104 129 + snoRNA gene predicted gene, 22986
Adam26b 8 43519864 to 43528137 8273 - protein coding gene a disintegrin and metallopeptidase domain 26B
Adam26a 8 43568278 to 43576707 8429 - protein coding gene a disintegrin and metallopeptidase domain 26A (testase 3)
Gm19838 8 43617078 to 43618771 1693 - pseudogene predicted gene, 19838
Gm5346 8 43624951 to 43627276 2325 - protein coding gene predicted gene 5346
Adam34 8 43650309 to 43703335 53026 - protein coding gene a disintegrin and metallopeptidase domain 34
Gm5347 8 43673721 to 43676047 2326 - unclassified gene predicted gene 5347
Tssr81144 8 43699489 to 43699506 17 - TSS region transcription start site region 81144
Gm35629 8 43700919 to 43701416 497 - pseudogene predicted gene, 35629
Tssr81145 8 43703413 to 43703424 11 - TSS region transcription start site region 81145
Tssr77110 8 43703446 to 43703458 12 + TSS region transcription start site region 77110
Tssr77111 8 43703475 to 43703493 18 + TSS region transcription start site region 77111
Gm45488 8 43703479 to 43754163 50684 + antisense lncRNA gene predicted gene 45488
Gm6011 8 43722273 to 43724065 1792 - pseudogene predicted gene 6011
Gm6303 8 43729479 to 43729949 470 - pseudogene predicted gene 6303
Gm45657 8 43749052 to 43750400 1348 - pseudogene predicted gene 45657
Gm45658 8 43804844 to 43805423 579 + pseudogene predicted gene 45658
Gm45659 8 43908656 to 43914604 5948 - lincRNA gene predicted gene 45659
Gm24591 8 44039250 to 44039361 111 + miRNA gene predicted gene, 24591
Gm19855 8 44048121 to 44048369 248 - pseudogene predicted gene, 19855
D8Dcr13 8 44064089 to 44064184 95 DNA segment DNA Segment, Chr 8, Derry C. Roopenian 13
D8Mit227 8 44099702 to 44099834 132 DNA segment DNA segment, Chr 8, Massachusetts Institute of Technology 227
Gm37972 8 44227718 to 44228545 827 - unclassified gene predicted gene, 37972
Tssr81146 8 44316812 to 44316817 5 - TSS region transcription start site region 81146
Gm26241 8 44547974 to 44548074 100 - miRNA gene predicted gene, 26241
Gm26089 8 44601833 to 44601939 106 + rRNA gene predicted gene, 26089
Tssr2556 8 44629765 to 44629767 2 + TSS region transcription start site region 2556
D8Mit296 8 44650951 to 44651031 80 DNA segment DNA Segment, Chr 8, Massachusetts Institute of Technology 296
D8Mit228 8 44728699 to 44728897 198 DNA segment DNA segment, Chr 8, Massachusetts Institute of Technology 228
Gm30397 8 44747479 to 44766239 18760 - lncRNA gene predicted gene, 30397
D8Mit5 8 44852670 to 44852835 165 DNA segment DNA segment, Chr 8, Massachusetts Institute of Technology 5
Gm9908 8 44934712 to 44935159 447 - bidirectional promoter lncRNA gene predicted gene 9908
Cpgi20290 8 44934747 to 44936105 1358 CpG island CpG island 20290
Tssr81147 8 44935153 to 44935172 19 - TSS region transcription start site region 81147
Tssr77112 8 44935264 to 44935314 50 + TSS region transcription start site region 77112
Tssr77113 8 44935335 to 44935347 12 + TSS region transcription start site region 77113
Tssr77114 8 44935366 to 44935375 9 + TSS region transcription start site region 77114
Tssr77115 8 44935396 to 44935408 12 + TSS region transcription start site region 77115
Tssr2557 8 44935429 to 44935439 10 + TSS region transcription start site region 2557
Fat1 8 44935447 to 45052257 116810 + protein coding gene FAT atypical cadherin 1
Tssr77116 8 44935992 to 44936007 15 + TSS region transcription start site region 77116
Cpgi20291 8 44937007 to 44938793 1786 CpG island CpG island 20291
Tssr77117 8 44938137 to 44938214 77 + TSS region transcription start site region 77117
Tssr77118 8 44938238 to 44938249 11 + TSS region transcription start site region 77118
Tssr77119 8 44950655 to 44950669 14 + TSS region transcription start site region 77119
Tssr77120 8 44951347 to 44951384 37 + TSS region transcription start site region 77120
Tssr77121 8 44957034 to 44957038 4 + TSS region transcription start site region 77121
Tssr77122 8 44961441 to 44961445 4 + TSS region transcription start site region 77122
Tssr77123 8 45007225 to 45007254 29 + TSS region transcription start site region 77123
Cpgi20292 8 45010418 to 45010645 227 CpG island CpG island 20292
Gm2366 8 45017216 to 45022385 5169 - antisense lncRNA gene predicted gene 2366
Cpgi20293 8 45021941 to 45022206 265 CpG island CpG island 20293
Tssr81148 8 45024752 to 45024769 17 - TSS region transcription start site region 81148
Cpgi20294 8 45043955 to 45044617 662 CpG island CpG island 20294
Tssr77124 8 45050920 to 45050933 13 + TSS region transcription start site region 77124
Cpgi20295 8 45051063 to 45051640 577 CpG island CpG island 20295
Tssr77125 8 45051500 to 45051550 50 + TSS region transcription start site region 77125
Tssr77126 8 45051556 to 45051657 101 + TSS region transcription start site region 77126
AY512931 8 45060702 to 45065418 4716 - lincRNA gene cDNA sequence AY512931
Cpgi20296 8 45068758 to 45069320 562 CpG island CpG island 20296
Mtnr1a 8 45069137 to 45088506 19369 + protein coding gene melatonin receptor 1A
Cpgi20297 8 45087356 to 45087609 253 CpG island CpG island 20297