Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 8:41293668-41924669

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21 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Pcm1 8 41239752 to 41332344 92592 + protein coding gene pericentriolar material 1
Tssr77097 8 41299130 to 41299133 3 + TSS region transcription start site region 77097
Tssr77098 8 41316011 to 41316029 18 + TSS region transcription start site region 77098
Tssr77099 8 41330686 to 41330699 13 + TSS region transcription start site region 77099
Asah1 8 41340197 to 41374773 34576 - protein coding gene N-acylsphingosine amidohydrolase 1
Tssr81109 8 41346133 to 41346153 20 - TSS region transcription start site region 81109
Tssr81110 8 41348628 to 41348644 16 - TSS region transcription start site region 81110
Cpgi20287 8 41374250 to 41375111 861 CpG island CpG island 20287
Tssr81111 8 41374602 to 41374677 75 - TSS region transcription start site region 81111
Tssr77100 8 41374839 to 41374881 42 + TSS region transcription start site region 77100
Frg1 8 41397459 to 41417074 19615 - protein coding gene FSHD region gene 1
Tssr81112 8 41400847 to 41400869 22 - TSS region transcription start site region 81112
Tssr81113 8 41407687 to 41407700 13 - TSS region transcription start site region 81113
Cpgi20288 8 41416722 to 41417366 644 CpG island CpG island 20288
Tssr81114 8 41416993 to 41417036 43 - TSS region transcription start site region 81114
Tssr81115 8 41417042 to 41417135 93 - TSS region transcription start site region 81115
Gapdh-ps14 8 41608668 to 41609669 1001 - pseudogene glyceraldehyde-3-phosphate dehydrogenase, pseudogene 14
Smarce1-ps1 8 41657593 to 41658669 1076 - pseudogene SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily e, member 1, pseodogene 1
2810404M03Rik 8 41827267 to 42046202 218935 + lincRNA gene RIKEN cDNA 2810404M03 gene
Tssr81116 8 41835308 to 41835315 7 - TSS region transcription start site region 81116
Hspd1-ps1 8 41923520 to 41927127 3607 + pseudogene heat shock protein 1 (chaperonin), pseudogene 1