Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

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Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 8:40874771-41234802

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158 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Slc7a2 8 40862367 to 40922070 59703 + protein coding gene solute carrier family 7 (cationic amino acid transporter, y+ system), member 2
Tssr76987 8 40875631 to 40875640 9 + TSS region transcription start site region 76987
Tssr76988 8 40877811 to 40877822 11 + TSS region transcription start site region 76988
Tssr76989 8 40880103 to 40880125 22 + TSS region transcription start site region 76989
Tssr76990 8 40882375 to 40882384 9 + TSS region transcription start site region 76990
Tssr76991 8 40884653 to 40884665 12 + TSS region transcription start site region 76991
Tssr76992 8 40884828 to 40884839 11 + TSS region transcription start site region 76992
Tssr76993 8 40885600 to 40885643 43 + TSS region transcription start site region 76993
Tssr76994 8 40886615 to 40886646 31 + TSS region transcription start site region 76994
Tssr81068 8 40887099 to 40887104 5 - TSS region transcription start site region 81068
Tssr76995 8 40887852 to 40887863 11 + TSS region transcription start site region 76995
Tssr76996 8 40887907 to 40887919 12 + TSS region transcription start site region 76996
Tssr76997 8 40888016 to 40888033 17 + TSS region transcription start site region 76997
Tssr76998 8 40888401 to 40888412 11 + TSS region transcription start site region 76998
Tssr76999 8 40889525 to 40889539 14 + TSS region transcription start site region 76999
Tssr77000 8 40890326 to 40890333 7 + TSS region transcription start site region 77000
Tssr77001 8 40890465 to 40890475 10 + TSS region transcription start site region 77001
Tssr77002 8 40890485 to 40890528 43 + TSS region transcription start site region 77002
Tssr77003 8 40890606 to 40890618 12 + TSS region transcription start site region 77003
Tssr77004 8 40890680 to 40890692 12 + TSS region transcription start site region 77004
Tssr77005 8 40890704 to 40890717 13 + TSS region transcription start site region 77005
Tssr77006 8 40890739 to 40890752 13 + TSS region transcription start site region 77006
Tssr77007 8 40892253 to 40892280 27 + TSS region transcription start site region 77007
Tssr77008 8 40892744 to 40892758 14 + TSS region transcription start site region 77008
Tssr77009 8 40893697 to 40893708 11 + TSS region transcription start site region 77009
Tssr77010 8 40894763 to 40894766 3 + TSS region transcription start site region 77010
Tssr77011 8 40898930 to 40898966 36 + TSS region transcription start site region 77011
Tssr77012 8 40899024 to 40899055 31 + TSS region transcription start site region 77012
Tssr81069 8 40899042 to 40899068 26 - TSS region transcription start site region 81069
Tssr77013 8 40899076 to 40899090 14 + TSS region transcription start site region 77013
Tssr77014 8 40899095 to 40899148 53 + TSS region transcription start site region 77014
Tssr77015 8 40899156 to 40899174 18 + TSS region transcription start site region 77015
Tssr77016 8 40899217 to 40899237 20 + TSS region transcription start site region 77016
Tssr77017 8 40899270 to 40899302 32 + TSS region transcription start site region 77017
Tssr77018 8 40900618 to 40900627 9 + TSS region transcription start site region 77018
Tssr77019 8 40902494 to 40902523 29 + TSS region transcription start site region 77019
Tssr77020 8 40902526 to 40902542 16 + TSS region transcription start site region 77020
Tssr77021 8 40902544 to 40902590 46 + TSS region transcription start site region 77021
Tssr77022 8 40904445 to 40904536 91 + TSS region transcription start site region 77022
Tssr81070 8 40904471 to 40904497 26 - TSS region transcription start site region 81070
Tssr77023 8 40905570 to 40905620 50 + TSS region transcription start site region 77023
Tssr77024 8 40905813 to 40905824 11 + TSS region transcription start site region 77024
Tssr77025 8 40905860 to 40905871 11 + TSS region transcription start site region 77025
Tssr77026 8 40906267 to 40906281 14 + TSS region transcription start site region 77026
Tssr77027 8 40906607 to 40906610 3 + TSS region transcription start site region 77027
Tssr77028 8 40906705 to 40906715 10 + TSS region transcription start site region 77028
Tssr77029 8 40906873 to 40906885 12 + TSS region transcription start site region 77029
Tssr77030 8 40907900 to 40907911 11 + TSS region transcription start site region 77030
Tssr77031 8 40908046 to 40908165 119 + TSS region transcription start site region 77031
Tssr77032 8 40908405 to 40908420 15 + TSS region transcription start site region 77032
Tssr77033 8 40908668 to 40908679 11 + TSS region transcription start site region 77033
Tssr77034 8 40908731 to 40908742 11 + TSS region transcription start site region 77034
Tssr77035 8 40909662 to 40909676 14 + TSS region transcription start site region 77035
Tssr77036 8 40910815 to 40910858 43 + TSS region transcription start site region 77036
Tssr77037 8 40911010 to 40911065 55 + TSS region transcription start site region 77037
Tssr77038 8 40912564 to 40912637 73 + TSS region transcription start site region 77038
Tssr77039 8 40913958 to 40914000 42 + TSS region transcription start site region 77039
Tssr77040 8 40914003 to 40914082 79 + TSS region transcription start site region 77040
Tssr77041 8 40914911 to 40914995 84 + TSS region transcription start site region 77041
Tssr77042 8 40915053 to 40915072 19 + TSS region transcription start site region 77042
Tssr77043 8 40915648 to 40915665 17 + TSS region transcription start site region 77043
Tssr77044 8 40915838 to 40915858 20 + TSS region transcription start site region 77044
Tssr77045 8 40915860 to 40915881 21 + TSS region transcription start site region 77045
Tssr77046 8 40916537 to 40916546 9 + TSS region transcription start site region 77046
Tssr77047 8 40917152 to 40917157 5 + TSS region transcription start site region 77047
Tssr77048 8 40917390 to 40917401 11 + TSS region transcription start site region 77048
Tssr77049 8 40917525 to 40917532 7 + TSS region transcription start site region 77049
Tssr77050 8 40917544 to 40917571 27 + TSS region transcription start site region 77050
Tssr77051 8 40917582 to 40917593 11 + TSS region transcription start site region 77051
Tssr77052 8 40917635 to 40917647 12 + TSS region transcription start site region 77052
Tssr77053 8 40917648 to 40917713 65 + TSS region transcription start site region 77053
Tssr77054 8 40917863 to 40917883 20 + TSS region transcription start site region 77054
Tssr77055 8 40917904 to 40917915 11 + TSS region transcription start site region 77055
Tssr77056 8 40918495 to 40918506 11 + TSS region transcription start site region 77056
Tssr77057 8 40918512 to 40918523 11 + TSS region transcription start site region 77057
Tssr77058 8 40918581 to 40918604 23 + TSS region transcription start site region 77058
Tssr77059 8 40918762 to 40918776 14 + TSS region transcription start site region 77059
Tssr77060 8 40918986 to 40919000 14 + TSS region transcription start site region 77060
Tssr77061 8 40919020 to 40919031 11 + TSS region transcription start site region 77061
Tssr77062 8 40919032 to 40919043 11 + TSS region transcription start site region 77062
Tssr77063 8 40919057 to 40919195 138 + TSS region transcription start site region 77063
Tssr77064 8 40919268 to 40919279 11 + TSS region transcription start site region 77064
Tssr77065 8 40919494 to 40919514 20 + TSS region transcription start site region 77065
Tssr77066 8 40919517 to 40919529 12 + TSS region transcription start site region 77066
Tssr77067 8 40919560 to 40919571 11 + TSS region transcription start site region 77067
Tssr77068 8 40919581 to 40919599 18 + TSS region transcription start site region 77068
Tssr77069 8 40919615 to 40919634 19 + TSS region transcription start site region 77069
Tssr77070 8 40919643 to 40919654 11 + TSS region transcription start site region 77070
Tssr77071 8 40919673 to 40919722 49 + TSS region transcription start site region 77071
Tssr77072 8 40919732 to 40919762 30 + TSS region transcription start site region 77072
Tssr77073 8 40919777 to 40919801 24 + TSS region transcription start site region 77073
Tssr77074 8 40919809 to 40919821 12 + TSS region transcription start site region 77074
Tssr77075 8 40919831 to 40919849 18 + TSS region transcription start site region 77075
Tssr77076 8 40920071 to 40920082 11 + TSS region transcription start site region 77076
Tssr77077 8 40920336 to 40920371 35 + TSS region transcription start site region 77077
Tssr77078 8 40920382 to 40920411 29 + TSS region transcription start site region 77078
Tssr77079 8 40920856 to 40920873 17 + TSS region transcription start site region 77079
Tssr77080 8 40921396 to 40921426 30 + TSS region transcription start site region 77080
Tssr77081 8 40921819 to 40921832 13 + TSS region transcription start site region 77081
Tssr77082 8 40926220 to 40926266 46 + TSS region transcription start site region 77082
Pdgfrl 8 40926233 to 40990782 64549 + protein coding gene platelet-derived growth factor receptor-like
Tssr77083 8 40926268 to 40926353 85 + TSS region transcription start site region 77083
Cpgi20284 8 40926279 to 40926923 644 CpG island CpG island 20284
Mtus1 8 40990914 to 41133726 142812 - protein coding gene mitochondrial tumor suppressor 1
Tssr81071 8 40992824 to 40992838 14 - TSS region transcription start site region 81071
Tssr81072 8 41006768 to 41006783 15 - TSS region transcription start site region 81072
Tssr81073 8 41015800 to 41015831 31 - TSS region transcription start site region 81073
Tssr81074 8 41016295 to 41016321 26 - TSS region transcription start site region 81074
Tssr81075 8 41016583 to 41016614 31 - TSS region transcription start site region 81075
Tssr81076 8 41016749 to 41016767 18 - TSS region transcription start site region 81076
Tssr81077 8 41016785 to 41016807 22 - TSS region transcription start site region 81077
B430010I23Rik 8 41017468 to 41024216 6748 + antisense lncRNA gene RIKEN cDNA B430010I23 gene
Tssr77084 8 41017730 to 41017744 14 + TSS region transcription start site region 77084
Tssr81078 8 41020541 to 41020545 4 - TSS region transcription start site region 81078
Tssr81079 8 41039568 to 41039581 13 - TSS region transcription start site region 81079
Gm16192 8 41039756 to 41042053 2297 + antisense lncRNA gene predicted gene 16192
Tssr81080 8 41041605 to 41041610 5 - TSS region transcription start site region 81080
Tssr81081 8 41041669 to 41041676 7 - TSS region transcription start site region 81081
Tssr81082 8 41041828 to 41041851 23 - TSS region transcription start site region 81082
Tssr81083 8 41041854 to 41041863 9 - TSS region transcription start site region 81083
Tssr81084 8 41041881 to 41041913 32 - TSS region transcription start site region 81084
Tssr81085 8 41041917 to 41041928 11 - TSS region transcription start site region 81085
Tssr77085 8 41044162 to 41044164 2 + TSS region transcription start site region 77085
D8Dcr10 8 41051048 to 41051151 103 DNA segment DNA Segment, Chr 8, Derry C. Roopenian 10
Gm16193 8 41053110 to 41064706 11596 + antisense lncRNA gene predicted gene 16193
Tssr81086 8 41053477 to 41053487 10 - TSS region transcription start site region 81086
Tssr81087 8 41054610 to 41054642 32 - TSS region transcription start site region 81087
Tssr81088 8 41054771 to 41054802 31 - TSS region transcription start site region 81088
Tssr81089 8 41054833 to 41054842 9 - TSS region transcription start site region 81089
Tssr81090 8 41054858 to 41054869 11 - TSS region transcription start site region 81090
Tssr81091 8 41054870 to 41054877 7 - TSS region transcription start site region 81091
Tssr81092 8 41056572 to 41056583 11 - TSS region transcription start site region 81092
Tssr81093 8 41061201 to 41061205 4 - TSS region transcription start site region 81093
Tssr81094 8 41083064 to 41083088 24 - TSS region transcription start site region 81094
Tssr2555 8 41100774 to 41100778 4 + TSS region transcription start site region 2555
Tssr81095 8 41101880 to 41101923 43 - TSS region transcription start site region 81095
Tssr81096 8 41112797 to 41112804 7 - TSS region transcription start site region 81096
Tssr81097 8 41112852 to 41112867 15 - TSS region transcription start site region 81097
Tssr81098 8 41118721 to 41118728 7 - TSS region transcription start site region 81098
Cpgi20285 8 41133118 to 41134327 1209 CpG island CpG island 20285
Tssr81099 8 41133651 to 41133663 12 - TSS region transcription start site region 81099
Tssr81100 8 41133697 to 41133755 58 - TSS region transcription start site region 81100
Tssr81101 8 41133987 to 41134002 15 - TSS region transcription start site region 81101
Tssr81102 8 41134228 to 41134286 58 - TSS region transcription start site region 81102
Tssr77086 8 41141715 to 41141740 25 + TSS region transcription start site region 77086
Gm39167 8 41154052 to 41172984 18932 + lncRNA gene predicted gene, 39167
Tssr77087 8 41154089 to 41154106 17 + TSS region transcription start site region 77087
Fgl1 8 41191434 to 41215156 23722 - protein coding gene fibrinogen-like protein 1
D8Mit295 8 41194772 to 41194868 96 DNA segment DNA Segment, Chr 8, Massachusetts Institute of Technology 295
Tssr81103 8 41209803 to 41209816 13 - TSS region transcription start site region 81103
Tssr81104 8 41209827 to 41209841 14 - TSS region transcription start site region 81104
Tssr81105 8 41209849 to 41209857 8 - TSS region transcription start site region 81105
Tssr81106 8 41215146 to 41215168 22 - TSS region transcription start site region 81106
Tssr81107 8 41217896 to 41217927 31 - TSS region transcription start site region 81107
Tssr77088 8 41218089 to 41218099 10 + TSS region transcription start site region 77088
Tssr77089 8 41218120 to 41218165 45 + TSS region transcription start site region 77089
Gm16348 8 41218139 to 41220894 2755 + lncRNA gene predicted gene 16348
Tssr77090 8 41218376 to 41218389 13 + TSS region transcription start site region 77090