Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 8:40211349-40881400

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97 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Fgf20 8 40279166 to 40286953 7787 - protein coding gene fibroblast growth factor 20
Cpgi20277 8 40286164 to 40286735 571 CpG island CpG island 20277
D8Mit339 8 40306765 to 40306887 122 DNA segment DNA segment, Chr 8, Massachusetts Institute of Technology 339
Micu3 8 40307458 to 40386308 78850 + protein coding gene mitochondrial calcium uptake family, member 3
Cpgi20278 8 40307548 to 40308775 1227 CpG island CpG island 20278
Mir7666 8 40307875 to 40307929 54 - miRNA gene microRNA 7666
Tssr81043 8 40307897 to 40307936 39 - TSS region transcription start site region 81043
Tssr76950 8 40308001 to 40308050 49 + TSS region transcription start site region 76950
Tssr81044 8 40308394 to 40308431 37 - TSS region transcription start site region 81044
Tssr76951 8 40385356 to 40385360 4 + TSS region transcription start site region 76951
Zdhhc2 8 40423002 to 40489592 66590 + protein coding gene zinc finger, DHHC domain containing 2
Cpgi20279 8 40423166 to 40424631 1465 CpG island CpG island 20279
Tssr2552 8 40423542 to 40423557 15 + TSS region transcription start site region 2552
Tssr76952 8 40423786 to 40423848 62 + TSS region transcription start site region 76952
Cpgi20280 8 40430982 to 40431245 263 CpG island CpG island 20280
Tssr76953 8 40431587 to 40431590 3 + TSS region transcription start site region 76953
Tssr76954 8 40431896 to 40431910 14 + TSS region transcription start site region 76954
Cnot7 8 40492540 to 40515847 23307 - protein coding gene CCR4-NOT transcription complex, subunit 7
Tssr81045 8 40495861 to 40495880 19 - TSS region transcription start site region 81045
Tssr81046 8 40510476 to 40510480 4 - TSS region transcription start site region 81046
Cpgi20281 8 40510836 to 40512541 1705 CpG island CpG island 20281
Tssr2553 8 40511216 to 40511229 13 - TSS region transcription start site region 2553
Tssr81047 8 40511258 to 40511274 16 - TSS region transcription start site region 81047
Tssr81048 8 40511277 to 40511297 20 - TSS region transcription start site region 81048
Tssr81049 8 40511298 to 40511346 48 - TSS region transcription start site region 81049
Tssr76955 8 40511416 to 40511444 28 + TSS region transcription start site region 76955
Tssr2554 8 40511477 to 40511488 11 + TSS region transcription start site region 2554
Tssr81050 8 40511663 to 40511756 93 - TSS region transcription start site region 81050
Tssr76956 8 40511769 to 40511787 18 + TSS region transcription start site region 76956
Vps37a 8 40511783 to 40551134 39351 + protein coding gene vacuolar protein sorting 37A
Tssr76957 8 40511789 to 40511862 73 + TSS region transcription start site region 76957
Tssr76958 8 40518825 to 40518869 44 + TSS region transcription start site region 76958
Tssr76959 8 40546303 to 40546332 29 + TSS region transcription start site region 76959
Tssr76960 8 40546349 to 40546400 51 + TSS region transcription start site region 76960
Tssr76961 8 40546530 to 40546549 19 + TSS region transcription start site region 76961
Tssr76962 8 40546595 to 40546617 22 + TSS region transcription start site region 76962
Tssr76963 8 40546621 to 40546640 19 + TSS region transcription start site region 76963
Tssr76964 8 40546679 to 40546705 26 + TSS region transcription start site region 76964
Mtmr7 8 40551095 to 40634797 83702 - protein coding gene myotubularin related protein 7
Tssr81051 8 40584681 to 40584722 41 - TSS region transcription start site region 81051
Tssr76965 8 40584936 to 40584954 18 + TSS region transcription start site region 76965
Tssr81052 8 40591834 to 40591842 8 - TSS region transcription start site region 81052
Tssr81053 8 40595142 to 40595153 11 - TSS region transcription start site region 81053
Tssr81054 8 40595164 to 40595173 9 - TSS region transcription start site region 81054
Tssr76966 8 40595549 to 40595579 30 + TSS region transcription start site region 76966
Tssr76967 8 40595665 to 40595674 9 + TSS region transcription start site region 76967
Tssr81055 8 40596210 to 40596216 6 - TSS region transcription start site region 81055
Tssr81056 8 40598014 to 40598026 12 - TSS region transcription start site region 81056
Tssr76968 8 40633580 to 40633610 30 + TSS region transcription start site region 76968
Cpgi20282 8 40634437 to 40635101 664 CpG island CpG island 20282
Tssr81057 8 40634729 to 40634744 15 - TSS region transcription start site region 81057
Tssr81058 8 40634750 to 40634775 25 - TSS region transcription start site region 81058
Tssr81059 8 40634776 to 40634806 30 - TSS region transcription start site region 81059
Tssr81060 8 40653679 to 40653724 45 - TSS region transcription start site region 81060
Tssr81061 8 40656020 to 40656026 6 - TSS region transcription start site region 81061
Tssr81062 8 40659910 to 40659915 5 - TSS region transcription start site region 81062
Tssr81063 8 40660417 to 40660430 13 - TSS region transcription start site region 81063
Tssr76969 8 40675048 to 40675056 8 + TSS region transcription start site region 76969
Tssr76970 8 40675059 to 40675086 27 + TSS region transcription start site region 76970
Adam24 8 40675077 to 40682199 7122 + protein coding gene a disintegrin and metallopeptidase domain 24 (testase 1)
Gm45660 8 40683497 to 40683647 150 - pseudogene predicted gene 45660
Gm8423 8 40712687 to 40713287 600 - pseudogene predicted gene 8423
Gm2080 8 40724835 to 40726407 1572 + pseudogene predicted gene 2080
Gm5749 8 40748003 to 40749092 1089 - pseudogene predicted gene 5749
Adam25 8 40752208 to 40756176 3968 + protein coding gene a disintegrin and metallopeptidase domain 25 (testase 2)
Tssr76971 8 40752227 to 40752245 18 + TSS region transcription start site region 76971
Gm8433 8 40765276 to 40766734 1458 + pseudogene predicted gene 8433
Gm8436 8 40789057 to 40790136 1079 - pseudogene predicted gene 8436
Tssr76972 8 40793272 to 40793297 25 + TSS region transcription start site region 76972
Adam20 8 40793273 to 40797303 4030 + protein coding gene a disintegrin and metallopeptidase domain 20
Adam39 8 40823009 to 40826861 3852 + protein coding gene a disintegrin and metallopeptidase domain 39
Tssr76973 8 40823026 to 40823065 39 + TSS region transcription start site region 76973
Gm5345 8 40853828 to 40855027 1199 - pseudogene predicted gene 5345
Tssr81064 8 40855095 to 40855102 7 - TSS region transcription start site region 81064
Gm8445 8 40855231 to 40856397 1166 + pseudogene predicted gene 8445
Tssr81065 8 40855553 to 40855557 4 - TSS region transcription start site region 81065
Tssr76974 8 40861829 to 40861843 14 + TSS region transcription start site region 76974
Cpgi20283 8 40862021 to 40862948 927 CpG island CpG island 20283
Tssr76975 8 40862182 to 40862250 68 + TSS region transcription start site region 76975
Tssr81066 8 40862239 to 40862248 9 - TSS region transcription start site region 81066
Tssr81067 8 40862254 to 40862307 53 - TSS region transcription start site region 81067
Tssr76976 8 40862261 to 40862272 11 + TSS region transcription start site region 76976
Slc7a2 8 40862367 to 40922070 59703 + protein coding gene solute carrier family 7 (cationic amino acid transporter, y+ system), member 2
Tssr76977 8 40862379 to 40862430 51 + TSS region transcription start site region 76977
Gm26584 8 40862395 to 40865647 3252 - lincRNA gene predicted gene, 26584
Tssr76978 8 40862442 to 40862453 11 + TSS region transcription start site region 76978
Tssr76979 8 40863109 to 40863157 48 + TSS region transcription start site region 76979
Tssr76980 8 40863167 to 40863184 17 + TSS region transcription start site region 76980
Tssr76981 8 40864294 to 40864309 15 + TSS region transcription start site region 76981
Tssr76982 8 40866607 to 40866625 18 + TSS region transcription start site region 76982
Tssr76983 8 40866716 to 40866735 19 + TSS region transcription start site region 76983
Tssr76984 8 40869596 to 40869614 18 + TSS region transcription start site region 76984
Tssr76985 8 40871286 to 40871318 32 + TSS region transcription start site region 76985
Tssr76986 8 40874401 to 40874415 14 + TSS region transcription start site region 76986
Tssr76987 8 40875631 to 40875640 9 + TSS region transcription start site region 76987
Tssr76988 8 40877811 to 40877822 11 + TSS region transcription start site region 76988
Tssr76989 8 40880103 to 40880125 22 + TSS region transcription start site region 76989