Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 8:39605985-40258256

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42 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Msr1 8 39581685 to 39642673 60988 - protein coding gene macrophage scavenger receptor 1
Tssr81015 8 39607547 to 39607559 12 - TSS region transcription start site region 81015
Tssr81016 8 39608152 to 39608163 11 - TSS region transcription start site region 81016
Tssr81017 8 39610464 to 39610479 15 - TSS region transcription start site region 81017
Tssr81018 8 39614079 to 39614087 8 - TSS region transcription start site region 81018
Tssr81019 8 39617459 to 39617472 13 - TSS region transcription start site region 81019
Tssr81020 8 39618399 to 39618427 28 - TSS region transcription start site region 81020
Tssr81021 8 39618433 to 39618445 12 - TSS region transcription start site region 81021
Tssr81022 8 39618652 to 39618666 14 - TSS region transcription start site region 81022
Tssr81023 8 39619233 to 39619243 10 - TSS region transcription start site region 81023
Tssr81024 8 39621677 to 39621684 7 - TSS region transcription start site region 81024
Tssr2551 8 39622253 to 39622274 21 - TSS region transcription start site region 2551
Tssr81025 8 39625088 to 39625130 42 - TSS region transcription start site region 81025
Tssr81026 8 39629245 to 39629257 12 - TSS region transcription start site region 81026
Tssr81027 8 39629348 to 39629355 7 - TSS region transcription start site region 81027
Tssr81028 8 39629398 to 39629409 11 - TSS region transcription start site region 81028
Tssr81029 8 39629517 to 39629533 16 - TSS region transcription start site region 81029
Tssr81030 8 39629639 to 39629650 11 - TSS region transcription start site region 81030
Tssr81031 8 39630333 to 39630346 13 - TSS region transcription start site region 81031
Tssr81032 8 39631197 to 39631206 9 - TSS region transcription start site region 81032
Tssr81033 8 39631307 to 39631318 11 - TSS region transcription start site region 81033
Tssr81034 8 39631332 to 39631369 37 - TSS region transcription start site region 81034
Tssr76945 8 39636156 to 39636174 18 + TSS region transcription start site region 76945
Tssr76946 8 39636192 to 39636205 13 + TSS region transcription start site region 76946
Gm36741 8 39636247 to 39708088 71841 + lncRNA gene predicted gene, 36741
Tssr81035 8 39637830 to 39637874 44 - TSS region transcription start site region 81035
Tssr81036 8 39639199 to 39639224 25 - TSS region transcription start site region 81036
Tssr81037 8 39642636 to 39642647 11 - TSS region transcription start site region 81037
Tssr81038 8 39642653 to 39642664 11 - TSS region transcription start site region 81038
Tssr81039 8 39642669 to 39642673 4 - TSS region transcription start site region 81039
Tssr81040 8 39643646 to 39643688 42 - TSS region transcription start site region 81040
Tssr81041 8 39643698 to 39643721 23 - TSS region transcription start site region 81041
Carcdq1 8 39709256 to 94689598 54980342 QTL cardiac collagen deposition QTL 1
Gm2033 8 39718680 to 39720966 2286 - pseudogene predicted gene 2033
Gm36795 8 39872396 to 39928157 55761 - lncRNA gene predicted gene, 36795
Tssr81042 8 39928126 to 39928135 9 - TSS region transcription start site region 81042
Gm10682 8 39930985 to 39933256 2271 protein coding gene predicted gene 10682
Tssr76947 8 39933357 to 39933397 40 + TSS region transcription start site region 76947
Gm8381 8 39940061 to 39940665 604 + pseudogene predicted gene 8381
Gm7082 8 40016714 to 40018248 1534 + pseudogene predicted gene 7082
Tssr76948 8 40124631 to 40124640 9 + TSS region transcription start site region 76948
Tssr76949 8 40124657 to 40124671 14 + TSS region transcription start site region 76949