Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 8:38624001-39614013

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68 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Sgcz 8 37522298 to 38661508 1139210 - protein coding gene sarcoglycan zeta
Tssr80985 8 38645802 to 38645804 2 - TSS region transcription start site region 80985
Gm40493 8 38659763 to 38671066 11303 + antisense lncRNA gene predicted gene, 40493
Cpgi20275 8 38659941 to 38661017 1076 CpG island CpG island 20275
Tssr80986 8 38661452 to 38661481 29 - TSS region transcription start site region 80986
Tssr80987 8 38661523 to 38661545 22 - TSS region transcription start site region 80987
Tssr80988 8 38661554 to 38661565 11 - TSS region transcription start site region 80988
Gm23128 8 38982904 to 38983035 131 - snoRNA gene predicted gene, 23128
Cpgi20276 8 39005519 to 39006478 959 CpG island CpG island 20276
Tssr76928 8 39005827 to 39005866 39 + TSS region transcription start site region 76928
Tusc3 8 39005845 to 39165114 159269 + protein coding gene tumor suppressor candidate 3
Tssr76929 8 39005880 to 39005952 72 + TSS region transcription start site region 76929
Tssr76930 8 39005961 to 39005972 11 + TSS region transcription start site region 76930
Tssr80989 8 39006185 to 39006192 7 - TSS region transcription start site region 80989
Tssr80990 8 39006215 to 39006224 9 - TSS region transcription start site region 80990
Tssr80991 8 39006248 to 39006263 15 - TSS region transcription start site region 80991
Tssr80992 8 39006267 to 39006273 6 - TSS region transcription start site region 80992
Tssr76931 8 39045661 to 39045691 30 + TSS region transcription start site region 76931
Tssr76932 8 39045975 to 39045992 17 + TSS region transcription start site region 76932
Tssr76933 8 39046024 to 39046036 12 + TSS region transcription start site region 76933
Tssr76934 8 39046037 to 39046063 26 + TSS region transcription start site region 76934
Tssr76935 8 39046073 to 39046082 9 + TSS region transcription start site region 76935
Tssr76936 8 39046595 to 39046650 55 + TSS region transcription start site region 76936
Tssr80993 8 39118939 to 39118957 18 - TSS region transcription start site region 80993
Tssr80994 8 39119001 to 39119013 12 - TSS region transcription start site region 80994
Tssr76937 8 39119126 to 39119139 13 + TSS region transcription start site region 76937
Tssr76938 8 39130741 to 39130745 4 + TSS region transcription start site region 76938
Tssr76939 8 39159355 to 39159358 3 + TSS region transcription start site region 76939
Gm1991 8 39162719 to 39163570 851 pseudogene predicted gene 1991
6430500C12Rik 8 39171655 to 39174191 2536 unclassified gene RIKEN cDNA 6430500C12 gene
Gm20948 8 39201049 to 39201497 448 + pseudogene predicted gene, 20948
Gm17766 8 39204126 to 39204462 336 + pseudogene predicted gene, 17766
Gm45398 8 39206468 to 39206632 164 + pseudogene predicted gene 45398
Zfp148-ps1 8 39282243 to 39285147 2904 + pseudogene zinc finger protein 148, pseudogene 1
Tssr76940 8 39297969 to 39298019 50 + TSS region transcription start site region 76940
Gm6213 8 39297980 to 39368268 70288 + lincRNA gene predicted gene 6213
Tssr76941 8 39298165 to 39298177 12 + TSS region transcription start site region 76941
Tssr76942 8 39298444 to 39298475 31 + TSS region transcription start site region 76942
Tssr76943 8 39298790 to 39298804 14 + TSS region transcription start site region 76943
Tssr76944 8 39300836 to 39300889 53 + TSS region transcription start site region 76944
Gm18644 8 39310452 to 39311694 1242 - pseudogene predicted gene, 18644
D8Mit294 8 39405411 to 39405520 109 DNA segment DNA Segment, Chr 8, Massachusetts Institute of Technology 294
Gm5609 8 39455910 to 39457176 1266 + pseudogene predicted gene 5609
Msr1 8 39581685 to 39642673 60988 - protein coding gene macrophage scavenger receptor 1
Tssr80995 8 39598360 to 39598399 39 - TSS region transcription start site region 80995
Tssr80996 8 39604537 to 39604582 45 - TSS region transcription start site region 80996
Tssr80997 8 39604586 to 39604605 19 - TSS region transcription start site region 80997
Tssr80998 8 39604960 to 39605018 58 - TSS region transcription start site region 80998
Tssr80999 8 39605024 to 39605080 56 - TSS region transcription start site region 80999
Tssr81000 8 39605219 to 39605264 45 - TSS region transcription start site region 81000
Tssr81001 8 39605275 to 39605280 5 - TSS region transcription start site region 81001
Tssr81002 8 39605289 to 39605306 17 - TSS region transcription start site region 81002
Tssr81003 8 39605311 to 39605332 21 - TSS region transcription start site region 81003
Tssr81004 8 39605371 to 39605384 13 - TSS region transcription start site region 81004
Tssr81005 8 39605392 to 39605409 17 - TSS region transcription start site region 81005
Tssr81006 8 39605429 to 39605446 17 - TSS region transcription start site region 81006
Tssr2550 8 39605467 to 39605474 7 - TSS region transcription start site region 2550
Tssr81007 8 39605494 to 39605511 17 - TSS region transcription start site region 81007
Tssr81008 8 39605604 to 39605612 8 - TSS region transcription start site region 81008
Tssr81009 8 39605620 to 39605643 23 - TSS region transcription start site region 81009
Tssr81010 8 39605647 to 39605665 18 - TSS region transcription start site region 81010
Tssr81011 8 39605725 to 39605732 7 - TSS region transcription start site region 81011
Tssr81012 8 39605750 to 39605761 11 - TSS region transcription start site region 81012
Tssr81013 8 39605918 to 39605925 7 - TSS region transcription start site region 81013
Tssr81014 8 39605945 to 39605958 13 - TSS region transcription start site region 81014
Tssr81015 8 39607547 to 39607559 12 - TSS region transcription start site region 81015
Tssr81016 8 39608152 to 39608163 11 - TSS region transcription start site region 81016
Tssr81017 8 39610464 to 39610479 15 - TSS region transcription start site region 81017