MPD: Genes and genomic regions

Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g. 17:44-45 ..or.. X:22500000-23000000

Click here to work with the entire chromosomal region 8:38062092-38662237

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18 genes found.

Gene symbol	Chromo- some	Coordinates (bp, mm10)	Size (bp)	Strand	Feature Type	Gene name
Sgcz	8	37522298 to 38661508	1139210	-	protein coding gene	sarcoglycan zeta
Gm16204	8	38077754 to 38079160	1406	+	pseudogene	predicted gene 16204
Tssr80982	8	38111170 to 38111173	3	-	TSS region	transcription start site region 80982
D8Dcr9	8	38153826 to 38153920	94		DNA segment	DNA Segment, Chr 8, Derry C. Roopenian 9
D8Mit174	8	38162803 to 38163000	197		DNA segment	DNA segment, Chr 8, Massachusetts Institute of Technology 174
n-TLcag2	8	38213201 to 38213283	82	+	tRNA gene	nuclear encoded tRNA leucine 2 (anticodon CAG)
Mir383	8	38252133 to 38252202	69	-	miRNA gene	microRNA 383
Tssr80983	8	38359772 to 38359775	3	-	TSS region	transcription start site region 80983
D8Mit331	8	38362092 to 38362237	145		DNA segment	DNA Segment, Chr 8, Massachusetts Institute of Technology-331
Gm18211	8	38417874 to 38418632	758		pseudogene	predicted gene, 18211
Tssr80984	8	38473726 to 38473730	4	-	TSS region	transcription start site region 80984
9330187G09Rik	8	38513399 to 38517638	4239		unclassified gene	RIKEN cDNA 9330187G09 gene
Tssr80985	8	38645802 to 38645804	2	-	TSS region	transcription start site region 80985
Gm40493	8	38659763 to 38671066	11303	+	antisense lncRNA gene	predicted gene, 40493
Cpgi20275	8	38659941 to 38661017	1076		CpG island	CpG island 20275
Tssr80986	8	38661452 to 38661481	29	-	TSS region	transcription start site region 80986
Tssr80987	8	38661523 to 38661545	22	-	TSS region	transcription start site region 80987
Tssr80988	8	38661554 to 38661565	11	-	TSS region	transcription start site region 80988