Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 8:3706824-4043548

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39 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Clec4g 8 3707064 to 3720651 13587 - protein coding gene C-type lectin domain family 4, member g
Gm16553 8 3709804 to 3739044 29240 + antisense lncRNA gene predicted gene 16553
Tssr2481 8 3711461 to 3711466 5 + TSS region transcription start site region 2481
Tssr80223 8 3717547 to 3717558 11 - TSS region transcription start site region 80223
Tssr80224 8 3717562 to 3717582 20 - TSS region transcription start site region 80224
Cpgi20034 8 3718625 to 3718900 275 CpG island CpG island 20034
Tssr80225 8 3720640 to 3720682 42 - TSS region transcription start site region 80225
Tssr80226 8 3720798 to 3720817 19 - TSS region transcription start site region 80226
Gm23886 8 3728925 to 3729237 312 - unclassified non-coding RNA gene predicted gene, 23886
Cd209a 8 3743397 to 3748984 5587 - protein coding gene CD209a antigen
Tssr80227 8 3748922 to 3748935 13 - TSS region transcription start site region 80227
Tssr80228 8 3748941 to 3748953 12 - TSS region transcription start site region 80228
Cpgi20035 8 3754396 to 3754558 162 CpG island CpG island 20035
Tssr80229 8 3754474 to 3754491 17 - TSS region transcription start site region 80229
Tssr80230 8 3754546 to 3754555 9 - TSS region transcription start site region 80230
Tssr80231 8 3754721 to 3754747 26 - TSS region transcription start site region 80231
Tssr80232 8 3754748 to 3754765 17 - TSS region transcription start site region 80232
Gm24934 8 3781020 to 3781130 110 + miRNA gene predicted gene, 24934
Rprl3 8 3803069 to 3803358 289 - RNase P RNA gene ribonuclease P RNA-like 3
Tssr80233 8 3803318 to 3803347 29 - TSS region transcription start site region 80233
Tssr80234 8 3803352 to 3803362 10 - TSS region transcription start site region 80234
Gm7381 8 3842096 to 3842395 299 - pseudogene predicted gene 7381
Cd209e 8 3847973 to 3854286 6313 - protein coding gene CD209e antigen
Cd209d 8 3871824 to 3878548 6724 - protein coding gene CD209d antigen
Tssr80235 8 3878549 to 3878568 19 - TSS region transcription start site region 80235
Cd209b 8 3917655 to 3926841 9186 - protein coding gene CD209b antigen
Tssr80236 8 3918216 to 3918219 3 - TSS region transcription start site region 80236
Tssr80237 8 3926807 to 3926838 31 - TSS region transcription start site region 80237
Cd209c 8 3940221 to 3954731 14510 - protein coding gene CD209c antigen
Gm39122 8 3965712 to 3969482 3770 - lncRNA gene predicted gene, 39122
Cpgi20036 8 3994140 to 3994576 436 CpG island CpG island 20036
Gm7389 8 3994626 to 3997506 2880 + pseudogene predicted gene 7389
Tssr76091 8 3995021 to 3995024 3 + TSS region transcription start site region 76091
Cpgi20037 8 3996633 to 3997103 470 CpG island CpG island 20037
Gm45048 8 4016454 to 4016882 428 - pseudogene predicted gene 45048
Gm7397 8 4018992 to 4021471 2479 + pseudogene predicted gene 7397
Gm45049 8 4034157 to 4034747 590 - pseudogene predicted gene 45049
Gm7407 8 4039857 to 4040421 564 - pseudogene predicted gene 7407
Tssr80238 8 4040490 to 4040508 18 - TSS region transcription start site region 80238