Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 8:36927837-38648017

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47 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Dlc1 8 36567751 to 36953143 385392 - protein coding gene deleted in liver cancer 1
Tssr80971 8 36952162 to 36952172 10 - TSS region transcription start site region 80971
Tssr80972 8 36952180 to 36952193 13 - TSS region transcription start site region 80972
Tssr80973 8 36952207 to 36952218 11 - TSS region transcription start site region 80973
Tssr80974 8 36952244 to 36952255 11 - TSS region transcription start site region 80974
Tssr80975 8 36952271 to 36952294 23 - TSS region transcription start site region 80975
Tssr80976 8 36952345 to 36952394 49 - TSS region transcription start site region 80976
Tssr80977 8 36952414 to 36952473 59 - TSS region transcription start site region 80977
Tssr80978 8 36953082 to 36953127 45 - TSS region transcription start site region 80978
Tssr80979 8 36953139 to 36953160 21 - TSS region transcription start site region 80979
Tssr80980 8 36953218 to 36953239 21 - TSS region transcription start site region 80980
Tssr80981 8 36953386 to 36953391 5 - TSS region transcription start site region 80981
Gm39166 8 36954740 to 36959348 4608 + lncRNA gene predicted gene, 39166
G630064G18Rik 8 36985573 to 37024238 38665 - antisense lncRNA gene RIKEN cDNA G630064G18 gene
Cpgi20273 8 36993526 to 36993771 245 CpG island CpG island 20273
Tssr76927 8 36993551 to 36993611 60 + TSS region transcription start site region 76927
AI429214 8 36993604 to 36995533 1929 + protein coding gene expressed sequence AI429214
Gm45690 8 37027093 to 37027338 245 + pseudogene predicted gene 45690
Gm10683 8 37088936 to 37090309 1373 - protein coding gene predicted gene 10683
Gm18267 8 37093318 to 37094468 1150 + pseudogene predicted gene, 18267
Gm8342 8 37094703 to 37095459 756 + pseudogene predicted gene 8342
Gm45524 8 37097018 to 37188061 91043 + lincRNA gene predicted gene 45524
Gm16530 8 37103795 to 37106002 2207 + pseudogene predicted gene, 16530
1700016D18Rik 8 37103795 to 37105507 1712 unclassified non-coding RNA gene RIKEN cDNA 1700016D18 gene
Gm3433 8 37103866 to 37106827 2961 + pseudogene predicted gene 3433
Gm7319 8 37154715 to 37155808 1093 + pseudogene predicted gene 7319
Gm45523 8 37183218 to 37184232 1014 - pseudogene predicted gene 45523
Gm45522 8 37250821 to 37250986 165 + pseudogene predicted gene 45522
Gm25126 8 37317477 to 37317578 101 - snRNA gene predicted gene, 25126
Gm45368 8 37322385 to 37350753 28368 - lincRNA gene predicted gene 45368
Gm6203 8 37371824 to 37373165 1341 - pseudogene predicted gene 6203
Gm45654 8 37400898 to 37401020 122 - pseudogene predicted gene 45654
Sgcz 8 37522298 to 38661508 1139210 - protein coding gene sarcoglycan zeta
Gm16205 8 37787666 to 37788692 1026 - pseudogene predicted gene 16205
Cpgi20274 8 37787837 to 37788017 180 CpG island CpG island 20274
Gm16204 8 38077754 to 38079160 1406 + pseudogene predicted gene 16204
Tssr80982 8 38111170 to 38111173 3 - TSS region transcription start site region 80982
D8Dcr9 8 38153826 to 38153920 94 DNA segment DNA Segment, Chr 8, Derry C. Roopenian 9
D8Mit174 8 38162803 to 38163000 197 DNA segment DNA segment, Chr 8, Massachusetts Institute of Technology 174
n-TLcag2 8 38213201 to 38213283 82 + tRNA gene nuclear encoded tRNA leucine 2 (anticodon CAG)
Mir383 8 38252133 to 38252202 69 - miRNA gene microRNA 383
Tssr80983 8 38359772 to 38359775 3 - TSS region transcription start site region 80983
D8Mit331 8 38362092 to 38362237 145 DNA segment DNA Segment, Chr 8, Massachusetts Institute of Technology-331
Gm18211 8 38417874 to 38418632 758 pseudogene predicted gene, 18211
Tssr80984 8 38473726 to 38473730 4 - TSS region transcription start site region 80984
9330187G09Rik 8 38513399 to 38517638 4239 unclassified gene RIKEN cDNA 9330187G09 gene
Tssr80985 8 38645802 to 38645804 2 - TSS region transcription start site region 80985