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Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 8:36327133-40177202

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195 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Gm5787 8 36372596 to 36373633 1037 - pseudogene predicted gene 5787
Gm26150 8 36406094 to 36406244 150 - snRNA gene predicted gene, 26150
Gm19140 8 36450380 to 36450800 420 + pseudogene predicted gene, 19140
Trmt9b 8 36457286 to 36514569 57283 + protein coding gene tRNA methyltransferase 9B
Cpgi20265 8 36457394 to 36458483 1089 CpG island CpG island 20265
Tssr76918 8 36458080 to 36458093 13 + TSS region transcription start site region 76918
Tssr76919 8 36458095 to 36458108 13 + TSS region transcription start site region 76919
Tssr76920 8 36458110 to 36458159 49 + TSS region transcription start site region 76920
Tssr76921 8 36458161 to 36458206 45 + TSS region transcription start site region 76921
D8Mit225 8 36492709 to 36492808 99 DNA segment DNA segment, Chr 8, Massachusetts Institute of Technology 225
Cpgi20266 8 36533145 to 36533358 213 CpG island CpG island 20266
Tssr76922 8 36538237 to 36538244 7 + TSS region transcription start site region 76922
Tssr80954 8 36547833 to 36547835 2 - TSS region transcription start site region 80954
Cpgi20267 8 36548898 to 36549432 534 CpG island CpG island 20267
Tssr76923 8 36549351 to 36549371 20 + TSS region transcription start site region 76923
Tssr76924 8 36549381 to 36549386 5 + TSS region transcription start site region 76924
Tssr76925 8 36549419 to 36549428 9 + TSS region transcription start site region 76925
Dlc1 8 36567751 to 36953143 385392 - protein coding gene deleted in liver cancer 1
Tssr80955 8 36568727 to 36568732 5 - TSS region transcription start site region 80955
Tssr80956 8 36570078 to 36570082 4 - TSS region transcription start site region 80956
Cpgi20268 8 36584593 to 36584931 338 CpG island CpG island 20268
Tssr80957 8 36586735 to 36586738 3 - TSS region transcription start site region 80957
Cpgi20269 8 36600793 to 36600957 164 CpG island CpG island 20269
Cpgi20270 8 36612757 to 36612952 195 CpG island CpG island 20270
Tssr80958 8 36612788 to 36612792 4 - TSS region transcription start site region 80958
Cpgi20271 8 36613296 to 36614232 936 CpG island CpG island 20271
Tssr80959 8 36613858 to 36613889 31 - TSS region transcription start site region 80959
Tssr80960 8 36613890 to 36613921 31 - TSS region transcription start site region 80960
Tssr80961 8 36613937 to 36613948 11 - TSS region transcription start site region 80961
D8Mit226 8 36631298 to 36631420 122 DNA segment DNA segment, Chr 8, Massachusetts Institute of Technology 226
9530004P13Rik 8 36646993 to 36647964 971 unclassified non-coding RNA gene RIKEN cDNA 9530004P13 gene
Tssr80962 8 36669215 to 36669217 2 - TSS region transcription start site region 80962
D8Mit97 8 36699774 to 36699889 115 DNA segment DNA segment, Chr 8, Massachusetts Institute of Technology 97
Tssr80963 8 36730811 to 36730818 7 - TSS region transcription start site region 80963
Tssr80964 8 36732100 to 36732116 16 - TSS region transcription start site region 80964
Tssr80965 8 36732136 to 36732147 11 - TSS region transcription start site region 80965
Cpgi20272 8 36732541 to 36733104 563 CpG island CpG island 20272
Tssr80966 8 36732789 to 36732863 74 - TSS region transcription start site region 80966
Tssr2549 8 36732869 to 36732896 27 - TSS region transcription start site region 2549
Tssr80967 8 36732897 to 36732908 11 - TSS region transcription start site region 80967
Tssr76926 8 36745111 to 36745135 24 + TSS region transcription start site region 76926
9430047G12Rik 8 36758820 to 36761678 2858 unclassified gene RIKEN cDNA 9430047G12 gene
Tssr80968 8 36816172 to 36816175 3 - TSS region transcription start site region 80968
Tssr80969 8 36827992 to 36828005 13 - TSS region transcription start site region 80969
Tssr80970 8 36828050 to 36828064 14 - TSS region transcription start site region 80970
Tssr80971 8 36952162 to 36952172 10 - TSS region transcription start site region 80971
Tssr80972 8 36952180 to 36952193 13 - TSS region transcription start site region 80972
Tssr80973 8 36952207 to 36952218 11 - TSS region transcription start site region 80973
Tssr80974 8 36952244 to 36952255 11 - TSS region transcription start site region 80974
Tssr80975 8 36952271 to 36952294 23 - TSS region transcription start site region 80975
Tssr80976 8 36952345 to 36952394 49 - TSS region transcription start site region 80976
Tssr80977 8 36952414 to 36952473 59 - TSS region transcription start site region 80977
Tssr80978 8 36953082 to 36953127 45 - TSS region transcription start site region 80978
Tssr80979 8 36953139 to 36953160 21 - TSS region transcription start site region 80979
Tssr80980 8 36953218 to 36953239 21 - TSS region transcription start site region 80980
Tssr80981 8 36953386 to 36953391 5 - TSS region transcription start site region 80981
Gm39166 8 36954740 to 36959348 4608 + lncRNA gene predicted gene, 39166
G630064G18Rik 8 36985573 to 37024238 38665 - antisense lncRNA gene RIKEN cDNA G630064G18 gene
Cpgi20273 8 36993526 to 36993771 245 CpG island CpG island 20273
Tssr76927 8 36993551 to 36993611 60 + TSS region transcription start site region 76927
AI429214 8 36993604 to 36995533 1929 + protein coding gene expressed sequence AI429214
Gm45690 8 37027093 to 37027338 245 + pseudogene predicted gene 45690
Gm10683 8 37088936 to 37090309 1373 - protein coding gene predicted gene 10683
Gm18267 8 37093318 to 37094468 1150 + pseudogene predicted gene, 18267
Gm8342 8 37094703 to 37095459 756 + pseudogene predicted gene 8342
Gm45524 8 37097018 to 37188061 91043 + lincRNA gene predicted gene 45524
Gm16530 8 37103795 to 37106002 2207 + pseudogene predicted gene, 16530
1700016D18Rik 8 37103795 to 37105507 1712 unclassified non-coding RNA gene RIKEN cDNA 1700016D18 gene
Gm3433 8 37103866 to 37106827 2961 + pseudogene predicted gene 3433
Gm7319 8 37154715 to 37155808 1093 + pseudogene predicted gene 7319
Gm45523 8 37183218 to 37184232 1014 - pseudogene predicted gene 45523
Gm45522 8 37250821 to 37250986 165 + pseudogene predicted gene 45522
Gm25126 8 37317477 to 37317578 101 - snRNA gene predicted gene, 25126
Gm45368 8 37322385 to 37350753 28368 - lincRNA gene predicted gene 45368
Gm6203 8 37371824 to 37373165 1341 - pseudogene predicted gene 6203
Gm45654 8 37400898 to 37401020 122 - pseudogene predicted gene 45654
Sgcz 8 37522298 to 38661508 1139210 - protein coding gene sarcoglycan zeta
Gm16205 8 37787666 to 37788692 1026 - pseudogene predicted gene 16205
Cpgi20274 8 37787837 to 37788017 180 CpG island CpG island 20274
Gm16204 8 38077754 to 38079160 1406 + pseudogene predicted gene 16204
Tssr80982 8 38111170 to 38111173 3 - TSS region transcription start site region 80982
D8Dcr9 8 38153826 to 38153920 94 DNA segment DNA Segment, Chr 8, Derry C. Roopenian 9
D8Mit174 8 38162803 to 38163000 197 DNA segment DNA segment, Chr 8, Massachusetts Institute of Technology 174
n-TLcag2 8 38213201 to 38213283 82 + tRNA gene nuclear encoded tRNA leucine 2 (anticodon CAG)
Mir383 8 38252133 to 38252202 69 - miRNA gene microRNA 383
Tssr80983 8 38359772 to 38359775 3 - TSS region transcription start site region 80983
D8Mit331 8 38362092 to 38362237 145 DNA segment DNA Segment, Chr 8, Massachusetts Institute of Technology-331
Gm18211 8 38417874 to 38418632 758 pseudogene predicted gene, 18211
Tssr80984 8 38473726 to 38473730 4 - TSS region transcription start site region 80984
9330187G09Rik 8 38513399 to 38517638 4239 unclassified gene RIKEN cDNA 9330187G09 gene
Tssr80985 8 38645802 to 38645804 2 - TSS region transcription start site region 80985
Gm40493 8 38659763 to 38671066 11303 + antisense lncRNA gene predicted gene, 40493
Cpgi20275 8 38659941 to 38661017 1076 CpG island CpG island 20275
Tssr80986 8 38661452 to 38661481 29 - TSS region transcription start site region 80986
Tssr80987 8 38661523 to 38661545 22 - TSS region transcription start site region 80987
Tssr80988 8 38661554 to 38661565 11 - TSS region transcription start site region 80988
Gm23128 8 38982904 to 38983035 131 - snoRNA gene predicted gene, 23128
Cpgi20276 8 39005519 to 39006478 959 CpG island CpG island 20276
Tssr76928 8 39005827 to 39005866 39 + TSS region transcription start site region 76928
Tusc3 8 39005845 to 39165114 159269 + protein coding gene tumor suppressor candidate 3
Tssr76929 8 39005880 to 39005952 72 + TSS region transcription start site region 76929
Tssr76930 8 39005961 to 39005972 11 + TSS region transcription start site region 76930
Tssr80989 8 39006185 to 39006192 7 - TSS region transcription start site region 80989
Tssr80990 8 39006215 to 39006224 9 - TSS region transcription start site region 80990
Tssr80991 8 39006248 to 39006263 15 - TSS region transcription start site region 80991
Tssr80992 8 39006267 to 39006273 6 - TSS region transcription start site region 80992
Tssr76931 8 39045661 to 39045691 30 + TSS region transcription start site region 76931
Tssr76932 8 39045975 to 39045992 17 + TSS region transcription start site region 76932
Tssr76933 8 39046024 to 39046036 12 + TSS region transcription start site region 76933
Tssr76934 8 39046037 to 39046063 26 + TSS region transcription start site region 76934
Tssr76935 8 39046073 to 39046082 9 + TSS region transcription start site region 76935
Tssr76936 8 39046595 to 39046650 55 + TSS region transcription start site region 76936
Tssr80993 8 39118939 to 39118957 18 - TSS region transcription start site region 80993
Tssr80994 8 39119001 to 39119013 12 - TSS region transcription start site region 80994
Tssr76937 8 39119126 to 39119139 13 + TSS region transcription start site region 76937
Tssr76938 8 39130741 to 39130745 4 + TSS region transcription start site region 76938
Tssr76939 8 39159355 to 39159358 3 + TSS region transcription start site region 76939
Gm1991 8 39162719 to 39163570 851 pseudogene predicted gene 1991
6430500C12Rik 8 39171655 to 39174191 2536 unclassified gene RIKEN cDNA 6430500C12 gene
Gm20948 8 39201049 to 39201497 448 + pseudogene predicted gene, 20948
Gm17766 8 39204126 to 39204462 336 + pseudogene predicted gene, 17766
Gm45398 8 39206468 to 39206632 164 + pseudogene predicted gene 45398
Zfp148-ps1 8 39282243 to 39285147 2904 + pseudogene zinc finger protein 148, pseudogene 1
Tssr76940 8 39297969 to 39298019 50 + TSS region transcription start site region 76940
Gm6213 8 39297980 to 39368268 70288 + lincRNA gene predicted gene 6213
Tssr76941 8 39298165 to 39298177 12 + TSS region transcription start site region 76941
Tssr76942 8 39298444 to 39298475 31 + TSS region transcription start site region 76942
Tssr76943 8 39298790 to 39298804 14 + TSS region transcription start site region 76943
Tssr76944 8 39300836 to 39300889 53 + TSS region transcription start site region 76944
Gm18644 8 39310452 to 39311694 1242 - pseudogene predicted gene, 18644
D8Mit294 8 39405411 to 39405520 109 DNA segment DNA Segment, Chr 8, Massachusetts Institute of Technology 294
Gm5609 8 39455910 to 39457176 1266 + pseudogene predicted gene 5609
Msr1 8 39581685 to 39642673 60988 - protein coding gene macrophage scavenger receptor 1
Tssr80995 8 39598360 to 39598399 39 - TSS region transcription start site region 80995
Tssr80996 8 39604537 to 39604582 45 - TSS region transcription start site region 80996
Tssr80997 8 39604586 to 39604605 19 - TSS region transcription start site region 80997
Tssr80998 8 39604960 to 39605018 58 - TSS region transcription start site region 80998
Tssr80999 8 39605024 to 39605080 56 - TSS region transcription start site region 80999
Tssr81000 8 39605219 to 39605264 45 - TSS region transcription start site region 81000
Tssr81001 8 39605275 to 39605280 5 - TSS region transcription start site region 81001
Tssr81002 8 39605289 to 39605306 17 - TSS region transcription start site region 81002
Tssr81003 8 39605311 to 39605332 21 - TSS region transcription start site region 81003
Tssr81004 8 39605371 to 39605384 13 - TSS region transcription start site region 81004
Tssr81005 8 39605392 to 39605409 17 - TSS region transcription start site region 81005
Tssr81006 8 39605429 to 39605446 17 - TSS region transcription start site region 81006
Tssr2550 8 39605467 to 39605474 7 - TSS region transcription start site region 2550
Tssr81007 8 39605494 to 39605511 17 - TSS region transcription start site region 81007
Tssr81008 8 39605604 to 39605612 8 - TSS region transcription start site region 81008
Tssr81009 8 39605620 to 39605643 23 - TSS region transcription start site region 81009
Tssr81010 8 39605647 to 39605665 18 - TSS region transcription start site region 81010
Tssr81011 8 39605725 to 39605732 7 - TSS region transcription start site region 81011
Tssr81012 8 39605750 to 39605761 11 - TSS region transcription start site region 81012
Tssr81013 8 39605918 to 39605925 7 - TSS region transcription start site region 81013
Tssr81014 8 39605945 to 39605958 13 - TSS region transcription start site region 81014
Tssr81015 8 39607547 to 39607559 12 - TSS region transcription start site region 81015
Tssr81016 8 39608152 to 39608163 11 - TSS region transcription start site region 81016
Tssr81017 8 39610464 to 39610479 15 - TSS region transcription start site region 81017
Tssr81018 8 39614079 to 39614087 8 - TSS region transcription start site region 81018
Tssr81019 8 39617459 to 39617472 13 - TSS region transcription start site region 81019
Tssr81020 8 39618399 to 39618427 28 - TSS region transcription start site region 81020
Tssr81021 8 39618433 to 39618445 12 - TSS region transcription start site region 81021
Tssr81022 8 39618652 to 39618666 14 - TSS region transcription start site region 81022
Tssr81023 8 39619233 to 39619243 10 - TSS region transcription start site region 81023
Tssr81024 8 39621677 to 39621684 7 - TSS region transcription start site region 81024
Tssr2551 8 39622253 to 39622274 21 - TSS region transcription start site region 2551
Tssr81025 8 39625088 to 39625130 42 - TSS region transcription start site region 81025
Tssr81026 8 39629245 to 39629257 12 - TSS region transcription start site region 81026
Tssr81027 8 39629348 to 39629355 7 - TSS region transcription start site region 81027
Tssr81028 8 39629398 to 39629409 11 - TSS region transcription start site region 81028
Tssr81029 8 39629517 to 39629533 16 - TSS region transcription start site region 81029
Tssr81030 8 39629639 to 39629650 11 - TSS region transcription start site region 81030
Tssr81031 8 39630333 to 39630346 13 - TSS region transcription start site region 81031
Tssr81032 8 39631197 to 39631206 9 - TSS region transcription start site region 81032
Tssr81033 8 39631307 to 39631318 11 - TSS region transcription start site region 81033
Tssr81034 8 39631332 to 39631369 37 - TSS region transcription start site region 81034
Tssr76945 8 39636156 to 39636174 18 + TSS region transcription start site region 76945
Tssr76946 8 39636192 to 39636205 13 + TSS region transcription start site region 76946
Gm36741 8 39636247 to 39708088 71841 + lncRNA gene predicted gene, 36741
Tssr81035 8 39637830 to 39637874 44 - TSS region transcription start site region 81035
Tssr81036 8 39639199 to 39639224 25 - TSS region transcription start site region 81036
Tssr81037 8 39642636 to 39642647 11 - TSS region transcription start site region 81037
Tssr81038 8 39642653 to 39642664 11 - TSS region transcription start site region 81038
Tssr81039 8 39642669 to 39642673 4 - TSS region transcription start site region 81039
Tssr81040 8 39643646 to 39643688 42 - TSS region transcription start site region 81040
Tssr81041 8 39643698 to 39643721 23 - TSS region transcription start site region 81041
Carcdq1 8 39709256 to 94689598 54980342 QTL cardiac collagen deposition QTL 1
Gm2033 8 39718680 to 39720966 2286 - pseudogene predicted gene 2033
Gm36795 8 39872396 to 39928157 55761 - lncRNA gene predicted gene, 36795
Tssr81042 8 39928126 to 39928135 9 - TSS region transcription start site region 81042
Gm10682 8 39930985 to 39933256 2271 protein coding gene predicted gene 10682
Tssr76947 8 39933357 to 39933397 40 + TSS region transcription start site region 76947
Gm8381 8 39940061 to 39940665 604 + pseudogene predicted gene 8381
Gm7082 8 40016714 to 40018248 1534 + pseudogene predicted gene 7082
Tssr76948 8 40124631 to 40124640 9 + TSS region transcription start site region 76948
Tssr76949 8 40124657 to 40124671 14 + TSS region transcription start site region 76949