Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 8:36221094-36591244

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34 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Lonrf1 8 36216064 to 36249516 33452 - protein coding gene LON peptidase N-terminal domain and ring finger 1
Tssr80949 8 36223112 to 36223115 3 - TSS region transcription start site region 80949
Gm39165 8 36226421 to 36228514 2093 + lncRNA gene predicted gene, 39165
Cpgi20264 8 36247728 to 36249811 2083 CpG island CpG island 20264
Gm35712 8 36247998 to 36315793 67795 + lncRNA gene predicted gene, 35712
Tssr80950 8 36248096 to 36248107 11 - TSS region transcription start site region 80950
Tssr76916 8 36248543 to 36248578 35 + TSS region transcription start site region 76916
Tssr2548 8 36248612 to 36248631 19 + TSS region transcription start site region 2548
Tssr80951 8 36249292 to 36249368 76 - TSS region transcription start site region 80951
Tssr76917 8 36249623 to 36249636 13 + TSS region transcription start site region 76917
Tssr80952 8 36265786 to 36265799 13 - TSS region transcription start site region 80952
Tssr80953 8 36280841 to 36280844 3 - TSS region transcription start site region 80953
Gm5787 8 36372596 to 36373633 1037 - pseudogene predicted gene 5787
Gm26150 8 36406094 to 36406244 150 - snRNA gene predicted gene, 26150
Gm19140 8 36450380 to 36450800 420 + pseudogene predicted gene, 19140
Trmt9b 8 36457286 to 36514569 57283 + protein coding gene tRNA methyltransferase 9B
Cpgi20265 8 36457394 to 36458483 1089 CpG island CpG island 20265
Tssr76918 8 36458080 to 36458093 13 + TSS region transcription start site region 76918
Tssr76919 8 36458095 to 36458108 13 + TSS region transcription start site region 76919
Tssr76920 8 36458110 to 36458159 49 + TSS region transcription start site region 76920
Tssr76921 8 36458161 to 36458206 45 + TSS region transcription start site region 76921
D8Mit225 8 36492709 to 36492808 99 DNA segment DNA segment, Chr 8, Massachusetts Institute of Technology 225
Cpgi20266 8 36533145 to 36533358 213 CpG island CpG island 20266
Tssr76922 8 36538237 to 36538244 7 + TSS region transcription start site region 76922
Tssr80954 8 36547833 to 36547835 2 - TSS region transcription start site region 80954
Cpgi20267 8 36548898 to 36549432 534 CpG island CpG island 20267
Tssr76923 8 36549351 to 36549371 20 + TSS region transcription start site region 76923
Tssr76924 8 36549381 to 36549386 5 + TSS region transcription start site region 76924
Tssr76925 8 36549419 to 36549428 9 + TSS region transcription start site region 76925
Dlc1 8 36567751 to 36953143 385392 - protein coding gene deleted in liver cancer 1
Tssr80955 8 36568727 to 36568732 5 - TSS region transcription start site region 80955
Tssr80956 8 36570078 to 36570082 4 - TSS region transcription start site region 80956
Cpgi20268 8 36584593 to 36584931 338 CpG island CpG island 20268
Tssr80957 8 36586735 to 36586738 3 - TSS region transcription start site region 80957