Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 8:35979884-36209895

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31 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
D8Mit190 8 35987864 to 35987996 132 DNA segment DNA segment, Chr 8, Massachusetts Institute of Technology 190
Cd8ts2 8 35987864 to 35987996 132 QTL CD8 T cell subset 2
Eae14 8 35987864 to 35987996 132 QTL experimental allergic encephalomyelitis susceptibility 14
Tssr76907 8 35999861 to 35999867 6 + TSS region transcription start site region 76907
Tssr76908 8 36025667 to 36025678 11 + TSS region transcription start site region 76908
Rps12-ps24 8 36025753 to 36026133 380 + pseudogene ribosomal protein S12, pseudogene 24
Gm39163 8 36066346 to 36073607 7261 + lncRNA gene predicted gene, 39163
Cpgi20261 8 36094257 to 36095497 1240 CpG island CpG island 20261
Tssr76909 8 36094682 to 36094705 23 + TSS region transcription start site region 76909
Tssr76910 8 36094708 to 36094720 12 + TSS region transcription start site region 76910
Prag1 8 36094828 to 36147787 52959 + protein coding gene PEAK1 related kinase activating pseudokinase 1
Tssr76911 8 36094853 to 36094868 15 + TSS region transcription start site region 76911
Tssr76912 8 36094884 to 36094895 11 + TSS region transcription start site region 76912
3010031K01Rik 8 36096191 to 36096986 795 unclassified gene RIKEN cDNA 3010031K01 gene
Tssr80943 8 36096693 to 36096699 6 - TSS region transcription start site region 80943
Cpgi20262 8 36103063 to 36103447 384 CpG island CpG island 20262
D8Dcr8 8 36129588 to 36129693 105 DNA segment DNA Segment, Chr 8, Derry C. Roopenian 8
Cpgi20263 8 36146374 to 36147395 1021 CpG island CpG island 20263
Gm38414 8 36156010 to 36161392 5382 + lincRNA gene predicted gene, 38414
Capsq4 8 36163000 to 92728652 56565652 QTL capsaicin sensitivity related QTL 4
D8Mit293 8 36163000 to 36163119 119 DNA segment DNA Segment, Chr 8, Massachusetts Institute of Technology 293
Tssr76913 8 36168940 to 36168981 41 + TSS region transcription start site region 76913
Tssr80944 8 36172983 to 36172994 11 - TSS region transcription start site region 80944
Gm39164 8 36174140 to 36176047 1907 - lincRNA gene predicted gene, 39164
Tssr80945 8 36176031 to 36176039 8 - TSS region transcription start site region 80945
Tssr80946 8 36176041 to 36176051 10 - TSS region transcription start site region 80946
4933430A20Rik 8 36176141 to 36178423 2282 + lincRNA gene RIKEN cDNA 4933430A20 gene
Tssr76914 8 36181796 to 36181800 4 + TSS region transcription start site region 76914
Tssr80947 8 36182276 to 36182301 25 - TSS region transcription start site region 80947
Gm35520 8 36188372 to 36202020 13648 + lincRNA gene predicted gene, 35520
Tssr76915 8 36188585 to 36188635 50 + TSS region transcription start site region 76915