Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 8:35270487-35720545

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39 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Gm34705 8 35348589 to 35367831 19242 - lncRNA gene predicted gene, 34705
Gm45469 8 35367750 to 35376392 8642 - bidirectional promoter lncRNA gene predicted gene 45469
Gm39161 8 35367857 to 35373295 5438 - lncRNA gene predicted gene, 39161
Cpgi20254 8 35375474 to 35376836 1362 CpG island CpG island 20254
Tssr76893 8 35375719 to 35375766 47 + TSS region transcription start site region 76893
Ppp1r3b 8 35375739 to 35388139 12400 + protein coding gene protein phosphatase 1, regulatory subunit 3B
Tssr76894 8 35375768 to 35375787 19 + TSS region transcription start site region 76894
Tssr76895 8 35376645 to 35376668 23 + TSS region transcription start site region 76895
Tssr76896 8 35376680 to 35376696 16 + TSS region transcription start site region 76896
Cpgi20255 8 35384184 to 35384737 553 CpG island CpG island 20255
Tssr80934 8 35394209 to 35394216 7 - TSS region transcription start site region 80934
Tssr2547 8 35400509 to 35400525 16 - TSS region transcription start site region 2547
Gm45301 8 35407471 to 35409506 2035 - lincRNA gene predicted gene 45301
Gm34911 8 35410285 to 35415504 5219 - lncRNA gene predicted gene, 34911
Tssr80935 8 35415390 to 35415424 34 - TSS region transcription start site region 80935
Tssr80936 8 35430746 to 35430764 18 - TSS region transcription start site region 80936
Tssr76897 8 35439347 to 35439353 6 + TSS region transcription start site region 76897
Gm34853 8 35439734 to 35443698 3964 + lincRNA gene predicted gene, 34853
Eri1 8 35465265 to 35495533 30268 - protein coding gene exoribonuclease 1
Tssr80937 8 35480559 to 35480564 5 - TSS region transcription start site region 80937
Cpgi20256 8 35494678 to 35495924 1246 CpG island CpG island 20256
Tssr76898 8 35495295 to 35495296 1 + TSS region transcription start site region 76898
Tssr80938 8 35495487 to 35495545 58 - TSS region transcription start site region 80938
Gm39162 8 35518396 to 35535312 16916 - lncRNA gene predicted gene, 39162
C030008P14Rik 8 35578976 to 35580073 1097 unclassified gene RIKEN cDNA C030008P14 gene
Gm16793 8 35582503 to 35588972 6469 - bidirectional promoter lncRNA gene predicted gene, 16793
Cpgi20257 8 35587451 to 35590491 3040 CpG island CpG island 20257
Tssr76899 8 35587780 to 35587825 45 + TSS region transcription start site region 76899
Mfhas1 8 35587798 to 35679449 91651 + protein coding gene malignant fibrous histiocytoma amplified sequence 1
Tssr76900 8 35587828 to 35587850 22 + TSS region transcription start site region 76900
Tssr80939 8 35588993 to 35589004 11 - TSS region transcription start site region 80939
Tssr80940 8 35589012 to 35589037 25 - TSS region transcription start site region 80940
Tssr76901 8 35602155 to 35602159 4 + TSS region transcription start site region 76901
Tssr76902 8 35602914 to 35602920 6 + TSS region transcription start site region 76902
D8Mit1002 8 35618916 to 35619231 315 DNA segment DNA Segment, Chr 8, Massachusetts Institute of Technology 1002
Tssr76903 8 35620794 to 35620798 4 + TSS region transcription start site region 76903
Tssr76904 8 35672359 to 35672366 7 + TSS region transcription start site region 76904
Cpgi20258 8 35707969 to 35708239 270 CpG island CpG island 20258
1700015I17Rik 8 35707991 to 35719504 11513 - lincRNA gene RIKEN cDNA 1700015I17 gene