Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 8:35100705-35400713

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28 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Gm34419 8 35094545 to 35105029 10484 + lincRNA gene predicted gene, 34419
Rpl31-ps23 8 35133176 to 35133532 356 - pseudogene ribosomal protein L31, pseudogene 23
Gm45626 8 35150086 to 35150446 360 - pseudogene predicted gene 45626
Gm45625 8 35179103 to 35183886 4783 - lincRNA gene predicted gene 45625
Tssr76890 8 35206539 to 35206542 3 + TSS region transcription start site region 76890
Tssr80930 8 35208444 to 35208456 12 - TSS region transcription start site region 80930
Tssr76891 8 35208771 to 35208781 10 + TSS region transcription start site region 76891
Tssr2546 8 35209120 to 35209143 23 - TSS region transcription start site region 2546
Tssr76892 8 35216527 to 35216533 6 + TSS region transcription start site region 76892
Gm34474 8 35218640 to 35222068 3428 + lincRNA gene predicted gene, 34474
Gm34533 8 35222941 to 35226035 3094 + lincRNA gene predicted gene, 34533
Gm34597 8 35233303 to 35245479 12176 - lincRNA gene predicted gene, 34597
Gm34647 8 35249761 to 35261735 11974 - lncRNA gene predicted gene, 34647
Tssr80931 8 35250687 to 35250704 17 - TSS region transcription start site region 80931
Tssr80932 8 35250705 to 35250713 8 - TSS region transcription start site region 80932
Tssr80933 8 35261423 to 35261463 40 - TSS region transcription start site region 80933
Gm34705 8 35348589 to 35367831 19242 - lncRNA gene predicted gene, 34705
Gm45469 8 35367750 to 35376392 8642 - bidirectional promoter lncRNA gene predicted gene 45469
Gm39161 8 35367857 to 35373295 5438 - lncRNA gene predicted gene, 39161
Cpgi20254 8 35375474 to 35376836 1362 CpG island CpG island 20254
Tssr76893 8 35375719 to 35375766 47 + TSS region transcription start site region 76893
Ppp1r3b 8 35375739 to 35388139 12400 + protein coding gene protein phosphatase 1, regulatory subunit 3B
Tssr76894 8 35375768 to 35375787 19 + TSS region transcription start site region 76894
Tssr76895 8 35376645 to 35376668 23 + TSS region transcription start site region 76895
Tssr76896 8 35376680 to 35376696 16 + TSS region transcription start site region 76896
Cpgi20255 8 35384184 to 35384737 553 CpG island CpG island 20255
Tssr80934 8 35394209 to 35394216 7 - TSS region transcription start site region 80934
Tssr2547 8 35400509 to 35400525 16 - TSS region transcription start site region 2547