Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 8:34172682-34762999

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46 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Vent1 8 31341658 to 34276410 2934752 QTL ventricular size 1
Gripgtt2 8 32020000 to 34520000 2500000 QTL glucose response to intraperitoneal glucose tolerance test 2, females only
Gm33638 8 34171547 to 34173638 2091 - lncRNA gene predicted gene, 33638
Cpgi20245 8 34207980 to 34208182 202 CpG island CpG island 20245
Tssr76870 8 34216824 to 34216846 22 + TSS region transcription start site region 76870
Gm29243 8 34216859 to 34226145 9286 + lincRNA gene predicted gene 29243
Tssr80908 8 34260528 to 34260573 45 - TSS region transcription start site region 80908
D8Mit189 8 34276295 to 34276410 115 DNA segment DNA segment, Chr 8, Massachusetts Institute of Technology 189
Gm23177 8 34295856 to 34295976 120 - miRNA gene predicted gene, 23177
Gm6100 8 34307285 to 34307687 402 - pseudogene predicted gene 6100
Gm8254 8 34321853 to 34322824 971 - pseudogene predicted gene 8254
Gm4889 8 34327910 to 34328353 443 + pseudogene predicted gene 4889
Gm45350 8 34344696 to 34362842 18146 - lincRNA gene predicted gene 45350
Cpgi20246 8 34372413 to 34372599 186 CpG island CpG island 20246
Gm33831 8 34380544 to 34385828 5284 - lincRNA gene predicted gene, 33831
Gm33910 8 34419204 to 34437622 18418 - lncRNA gene predicted gene, 33910
Gm45349 8 34419237 to 34472995 53758 - lincRNA gene predicted gene 45349
Gm39159 8 34440726 to 34455836 15110 + lncRNA gene predicted gene, 39159
Cpgi20247 8 34455534 to 34455702 168 CpG island CpG island 20247
Gm46038 8 34456918 to 34488105 31187 + lncRNA gene predicted gene, 46038
Gm39160 8 34462682 to 34472999 10317 - lncRNA gene predicted gene, 39160
Gm40489 8 34488965 to 34492650 3685 + lncRNA gene predicted gene, 40489
Tssr76871 8 34507158 to 34507171 13 + TSS region transcription start site region 76871
Gm8268 8 34507207 to 34507664 457 + pseudogene predicted gene 8268
Gm33968 8 34523318 to 34526628 3310 + lincRNA gene predicted gene, 33968
Tssr80909 8 34529093 to 34529102 9 - TSS region transcription start site region 80909
Tssr80910 8 34529103 to 34529111 8 - TSS region transcription start site region 80910
4930507A01Rik 8 34583024 to 34584492 1468 unclassified gene RIKEN cDNA 4930507A01 gene
Gm46068 8 34583456 to 34585026 1570 - lncRNA gene predicted gene, 46068
B930018H19Rik 8 34589420 to 34640316 50896 - lincRNA gene RIKEN cDNA B930018H19 gene
Tssr76872 8 34608273 to 34608311 38 + TSS region transcription start site region 76872
Gm34096 8 34608305 to 34619429 11124 + lincRNA gene predicted gene, 34096
Tssr76873 8 34622453 to 34622458 5 + TSS region transcription start site region 76873
Tssr80911 8 34622970 to 34622976 6 - TSS region transcription start site region 80911
Tssr76874 8 34623007 to 34623051 44 + TSS region transcription start site region 76874
Tssr76875 8 34623536 to 34623542 6 + TSS region transcription start site region 76875
Mnif1 8 34642776 to 44852835 10210059 QTL macronutrient intake, fat 1
D8Mit24 8 34642776 to 34642953 177 DNA segment DNA segment, Chr 8, Massachusetts Institute of Technology 24
Scc8 8 34642953 to 7162499 -27480454 QTL colon tumor susceptibility 8
Gm45627 8 34658106 to 34659369 1263 - lincRNA gene predicted gene 45627
Gm46069 8 34688679 to 34690159 1480 - lncRNA gene predicted gene, 46069
Cpgi20248 8 34689555 to 34689811 256 CpG island CpG island 20248
Tssr80912 8 34689880 to 34689906 26 - TSS region transcription start site region 80912
Tssr80913 8 34759056 to 34759060 4 - TSS region transcription start site region 80913
Tssr76876 8 34760873 to 34760876 3 + TSS region transcription start site region 76876
Eae31 8 114837007 to 34642776 -80194231 QTL experimental allergic encephalomyelitis susceptibility 31