Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 8:34152285-34462687

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34 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Vent1 8 31341658 to 34276410 2934752 QTL ventricular size 1
Tssr2544 8 34152346 to 34152350 4 + TSS region transcription start site region 2544
Gm45269 8 34152690 to 34152971 281 + pseudogene predicted gene 45269
Cpgi20244 8 34154357 to 34155191 834 CpG island CpG island 20244
Tssr80904 8 34154439 to 34154449 10 - TSS region transcription start site region 80904
Tssr76865 8 34154570 to 34154654 84 + TSS region transcription start site region 76865
Saraf 8 34154575 to 34170821 16246 + protein coding gene store-operated calcium entry-associated regulatory factor
Tssr76866 8 34154662 to 34154686 24 + TSS region transcription start site region 76866
Tssr76867 8 34154699 to 34154730 31 + TSS region transcription start site region 76867
Tssr80905 8 34155012 to 34155017 5 - TSS region transcription start site region 80905
Tssr80906 8 34155043 to 34155056 13 - TSS region transcription start site region 80906
Tssr76868 8 34155452 to 34155456 4 + TSS region transcription start site region 76868
Tssr80907 8 34156580 to 34156585 5 - TSS region transcription start site region 80907
Tssr76869 8 34156880 to 34156885 5 + TSS region transcription start site region 76869
Mir6395 8 34166622 to 34166712 90 - miRNA gene microRNA 6395
Gm33638 8 34171547 to 34173638 2091 - lncRNA gene predicted gene, 33638
Cpgi20245 8 34207980 to 34208182 202 CpG island CpG island 20245
Tssr76870 8 34216824 to 34216846 22 + TSS region transcription start site region 76870
Gm29243 8 34216859 to 34226145 9286 + lincRNA gene predicted gene 29243
Tssr80908 8 34260528 to 34260573 45 - TSS region transcription start site region 80908
D8Mit189 8 34276295 to 34276410 115 DNA segment DNA segment, Chr 8, Massachusetts Institute of Technology 189
Gm23177 8 34295856 to 34295976 120 - miRNA gene predicted gene, 23177
Gm6100 8 34307285 to 34307687 402 - pseudogene predicted gene 6100
Gm8254 8 34321853 to 34322824 971 - pseudogene predicted gene 8254
Gm4889 8 34327910 to 34328353 443 + pseudogene predicted gene 4889
Gm45350 8 34344696 to 34362842 18146 - lincRNA gene predicted gene 45350
Cpgi20246 8 34372413 to 34372599 186 CpG island CpG island 20246
Gm33831 8 34380544 to 34385828 5284 - lincRNA gene predicted gene, 33831
Gm33910 8 34419204 to 34437622 18418 - lncRNA gene predicted gene, 33910
Gm45349 8 34419237 to 34472995 53758 - lincRNA gene predicted gene 45349
Gm39159 8 34440726 to 34455836 15110 + lncRNA gene predicted gene, 39159
Cpgi20247 8 34455534 to 34455702 168 CpG island CpG island 20247
Gm46038 8 34456918 to 34488105 31187 + lncRNA gene predicted gene, 46038
Gm39160 8 34462682 to 34472999 10317 - lncRNA gene predicted gene, 39160