Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 8:31456078-33492346

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86 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Gm45303 8 31491976 to 31500090 8114 + lincRNA gene predicted gene 45303
Gm23539 8 31544463 to 31544686 223 - unclassified non-coding RNA gene predicted gene, 23539
Gm45304 8 31598979 to 31663828 64849 - lincRNA gene predicted gene 45304
Gm24184 8 31661331 to 31661431 100 - unclassified non-coding RNA gene predicted gene, 24184
Gm5117 8 31737208 to 31739760 2552 - pseudogene predicted gene 5117
Nrg1 8 31814551 to 32884029 1069478 - protein coding gene neuregulin 1
Tssr80818 8 31918352 to 31918368 16 - TSS region transcription start site region 80818
Cpgi20229 8 31918627 to 31918907 280 CpG island CpG island 20229
Tssr80819 8 31918775 to 31918801 26 - TSS region transcription start site region 80819
Tssr80820 8 31918817 to 31918829 12 - TSS region transcription start site region 80820
Tssr80821 8 31918836 to 31918877 41 - TSS region transcription start site region 80821
Gm33223 8 31919554 to 31926205 6651 + lncRNA gene predicted gene, 33223
Tssr80822 8 31950046 to 31950074 28 - TSS region transcription start site region 80822
Tssr80823 8 31950082 to 31950091 9 - TSS region transcription start site region 80823
Tssr2537 8 31975103 to 31975109 6 + TSS region transcription start site region 2537
Tssr80824 8 32004840 to 32004845 5 - TSS region transcription start site region 80824
Cpgi20230 8 32008372 to 32010234 1862 CpG island CpG island 20230
Gm26578 8 32008504 to 32015759 7255 + lincRNA gene predicted gene, 26578
Tssr80825 8 32009470 to 32009480 10 - TSS region transcription start site region 80825
Tssr80826 8 32009488 to 32009519 31 - TSS region transcription start site region 80826
Tssr80827 8 32009528 to 32009541 13 - TSS region transcription start site region 80827
W10q14 8 32016544 to 71287993 39271449 QTL weight 10 weeks QTL 14
Orq3 8 32016544 to 71287993 39271449 QTL ovulation rate QTL 3
Alcw6 8 32016544 to 32016701 157 QTL alcohol withdrawal 6
Hk 8 32016544 to 49436343 17419799 heritable phenotypic marker hook
Egq12 8 32016544 to 71287993 39271449 QTL early growth QTL 12
D8Mit4 8 32016544 to 32016701 157 DNA segment DNA segment, Chr 8, Massachusetts Institute of Technology 4
Daq19 8 32016544 to 32016701 157 QTL directional asymmetry QTL 19
W6q9 8 32016544 to 71287993 39271449 QTL weight 6 weeks QTL 9
Gripgtt2 8 32020000 to 34520000 2500000 QTL glucose response to intraperitoneal glucose tolerance test 2, females only
2010007E15Rik 8 32077166 to 32083873 6707 unclassified gene RIKEN cDNA 2010007E15 gene
Gm8179 8 32151895 to 32181847 29952 + lncRNA gene predicted gene 8179
Tssr76810 8 32160217 to 32160233 16 + TSS region transcription start site region 76810
Gm22140 8 32186129 to 32186248 119 + snRNA gene predicted gene, 22140
Tssr80828 8 32264246 to 32264251 5 - TSS region transcription start site region 80828
Cpgi20231 8 32293142 to 32293406 264 CpG island CpG island 20231
D8Mit291 8 32337375 to 32337469 94 DNA segment DNA Segment, Chr 8, Massachusetts Institute of Technology 291
Tssr80829 8 32421139 to 32421150 11 - TSS region transcription start site region 80829
Tssr80830 8 32454850 to 32454874 24 - TSS region transcription start site region 80830
Gm46076 8 32471078 to 32477346 6268 - pseudogene predicted gene, 46076
Tssr80831 8 32477351 to 32477353 2 - TSS region transcription start site region 80831
Tssr80832 8 32610677 to 32610713 36 - TSS region transcription start site region 80832
Tssr80833 8 32649644 to 32649647 3 - TSS region transcription start site region 80833
Tssr80834 8 32668429 to 32668435 6 - TSS region transcription start site region 80834
Tssr80835 8 32673697 to 32673707 10 - TSS region transcription start site region 80835
Tssr2538 8 32712501 to 32712505 4 + TSS region transcription start site region 2538
Gm39155 8 32751734 to 32853374 101640 + lncRNA gene predicted gene, 39155
Tssr80836 8 32763037 to 32763047 10 - TSS region transcription start site region 80836
D8Mit64 8 32786988 to 32787154 166 DNA segment DNA segment, Chr 8, Massachusetts Institute of Technology 64
Hbnr12 8 32786988 to 50837502 18050514 QTL Heligmosomoides bakeri nematode resistance 12
Tssr80837 8 32819771 to 32819782 11 - TSS region transcription start site region 80837
Tssr80838 8 32819918 to 32819931 13 - TSS region transcription start site region 80838
Tssr80839 8 32820156 to 32820184 28 - TSS region transcription start site region 80839
Tssr80840 8 32820241 to 32820253 12 - TSS region transcription start site region 80840
Tssr80841 8 32820268 to 32820296 28 - TSS region transcription start site region 80841
D8Mit63 8 32828411 to 32828615 204 DNA segment DNA segment, Chr 8, Massachusetts Institute of Technology 63
Tssr80842 8 32874822 to 32874826 4 - TSS region transcription start site region 80842
Cpgi20232 8 32883119 to 32885084 1965 CpG island CpG island 20232
Tssr80843 8 32884288 to 32884300 12 - TSS region transcription start site region 80843
Tssr80844 8 32884633 to 32884661 28 - TSS region transcription start site region 80844
Tssr80845 8 32884903 to 32884915 12 - TSS region transcription start site region 80845
Gm3985 8 32888505 to 32950026 61521 - lincRNA gene predicted gene 3985
Gm33082 8 32890742 to 32892657 1915 + lncRNA gene predicted gene, 33082
Gm45587 8 32972831 to 33056091 83260 - lincRNA gene predicted gene 45587
Gm39156 8 33071052 to 33095369 24317 - lncRNA gene predicted gene, 39156
D8Mit224 8 33079345 to 33079669 324 DNA segment DNA segment, Chr 8, Massachusetts Institute of Technology 224
Pgia4 8 33079345 to 33079669 324 QTL proteoglycan induced arthritis 4
Gm33281 8 33116803 to 33149512 32709 - lncRNA gene predicted gene, 33281
Gm6877 8 33191196 to 33192296 1100 - pseudogene predicted pseudogene 6877
Wrn 8 33234384 to 33385527 151143 - protein coding gene Werner syndrome RecQ like helicase
Tssr80846 8 33234931 to 33234951 20 - TSS region transcription start site region 80846
Tssr80847 8 33330574 to 33330604 30 - TSS region transcription start site region 80847
Cpgi20233 8 33385057 to 33386826 1769 CpG island CpG island 20233
Tssr80848 8 33385442 to 33385453 11 - TSS region transcription start site region 80848
Tssr80849 8 33385470 to 33385517 47 - TSS region transcription start site region 80849
Tssr76811 8 33385616 to 33385681 65 + TSS region transcription start site region 76811
Tssr76812 8 33385826 to 33385894 68 + TSS region transcription start site region 76812
Purg 8 33386325 to 33417467 31142 + protein coding gene purine-rich element binding protein G
Tssr2539 8 33411168 to 33411172 4 + TSS region transcription start site region 2539
Tssr76813 8 33414607 to 33414610 3 + TSS region transcription start site region 76813
5930422O12Rik 8 33428709 to 33429548 839 + unclassified gene RIKEN cDNA 5930422O12 gene
D8Mit337 8 33430309 to 33430409 100 DNA segment DNA segment, Chr 8, Massachusetts Institute of Technology 337
Gm8201 8 33434510 to 33435307 797 - pseudogene predicted gene 8201
Tssr76814 8 33484190 to 33484203 13 + TSS region transcription start site region 76814
Hmgb1-rs17 8 33484196 to 33485167 971 + pseudogene high mobility group box 1, related sequence 17
Bmd39 8 117238700 to 32016544 -85222156 QTL bone mineral density 39