Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 8:31114463-31974686

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44 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Rnf122 8 31111820 to 31131482 19662 + protein coding gene ring finger protein 122
Tssr76801 8 31115038 to 31115063 25 + TSS region transcription start site region 76801
Tssr76802 8 31115092 to 31115103 11 + TSS region transcription start site region 76802
Tssr76803 8 31129402 to 31129412 10 + TSS region transcription start site region 76803
Snord13 8 31149861 to 31149958 97 - snoRNA gene small nucleolar RNA, C/D box 13
Cpgi20225 8 31149943 to 31150372 429 CpG island CpG island 20225
Tssr80813 8 31149966 to 31149970 4 - TSS region transcription start site region 80813
Tssr76804 8 31150307 to 31150346 39 + TSS region transcription start site region 76804
Tti2 8 31150316 to 31164703 14387 + protein coding gene TELO2 interacting protein 2
Tssr76805 8 31150431 to 31150434 3 + TSS region transcription start site region 76805
Cpgi20226 8 31150600 to 31151282 682 CpG island CpG island 20226
Mak16 8 31159468 to 31168724 9256 - protein coding gene MAK16 homolog
Tssr80814 8 31163096 to 31163106 10 - TSS region transcription start site region 80814
Tssr80815 8 31167816 to 31167824 8 - TSS region transcription start site region 80815
Cpgi20227 8 31168260 to 31169202 942 CpG island CpG island 20227
Tssr80816 8 31168699 to 31168746 47 - TSS region transcription start site region 80816
Tssr80817 8 31168747 to 31168769 22 - TSS region transcription start site region 80817
Tssr76806 8 31168811 to 31168884 73 + TSS region transcription start site region 76806
Cpgi20228 8 31187140 to 31187818 678 CpG island CpG island 20228
Tssr76807 8 31187317 to 31187357 40 + TSS region transcription start site region 76807
Fut10 8 31187331 to 31261738 74407 + protein coding gene fucosyltransferase 10
Tssr76808 8 31187367 to 31187392 25 + TSS region transcription start site region 76808
Tssr76809 8 31187399 to 31187410 11 + TSS region transcription start site region 76809
Gm8051 8 31214886 to 31215351 465 - pseudogene predicted gene 8051
Gm8168 8 31279867 to 31280814 947 - pseudogene predicted gene 8168
D8Mit94 8 31341658 to 31341811 153 DNA segment DNA segment, Chr 8, Massachusetts Institute of Technology 94
Vent1 8 31341658 to 34276410 2934752 QTL ventricular size 1
7420700N18Rik 8 31378813 to 31382439 3626 + lincRNA gene RIKEN cDNA 7420700N18 gene
Gm36113 8 31379254 to 31380551 1297 - pseudogene predicted gene, 36113
Gm19096 8 31380569 to 31381316 747 - pseudogene predicted gene, 19096
Gm45303 8 31491976 to 31500090 8114 + lincRNA gene predicted gene 45303
Gm23539 8 31544463 to 31544686 223 - unclassified non-coding RNA gene predicted gene, 23539
Gm45304 8 31598979 to 31663828 64849 - lincRNA gene predicted gene 45304
Gm24184 8 31661331 to 31661431 100 - unclassified non-coding RNA gene predicted gene, 24184
Gm5117 8 31737208 to 31739760 2552 - pseudogene predicted gene 5117
Nrg1 8 31814551 to 32884029 1069478 - protein coding gene neuregulin 1
Tssr80818 8 31918352 to 31918368 16 - TSS region transcription start site region 80818
Cpgi20229 8 31918627 to 31918907 280 CpG island CpG island 20229
Tssr80819 8 31918775 to 31918801 26 - TSS region transcription start site region 80819
Tssr80820 8 31918817 to 31918829 12 - TSS region transcription start site region 80820
Tssr80821 8 31918836 to 31918877 41 - TSS region transcription start site region 80821
Gm33223 8 31919554 to 31926205 6651 + lncRNA gene predicted gene, 33223
Tssr80822 8 31950046 to 31950074 28 - TSS region transcription start site region 80822
Tssr80823 8 31950082 to 31950091 9 - TSS region transcription start site region 80823