Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 8:2811922-3541952

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82 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Gm44634 8 3056294 to 3056445 151 + pseudogene predicted gene 44634
Gm30220 8 3088991 to 3091201 2210 - lncRNA gene predicted gene, 30220
Gm7346 8 3093369 to 3095187 1818 + pseudogene predicted gene 7346
Gm25775 8 3099386 to 3099506 120 - miRNA gene predicted gene, 25775
Gm18210 8 3104279 to 3105799 1520 + pseudogene predicted gene, 18210
Vmn2r-ps88 8 3139161 to 3139964 803 + pseudogene vomeronasal 2, receptor, pseudogene 88
Insr 8 3150922 to 3279649 128727 - protein coding gene insulin receptor
Tssr80185 8 3155248 to 3155252 4 - TSS region transcription start site region 80185
Tssr80186 8 3176712 to 3176733 21 - TSS region transcription start site region 80186
Tssr80187 8 3176922 to 3176952 30 - TSS region transcription start site region 80187
Tssr80188 8 3177033 to 3177059 26 - TSS region transcription start site region 80188
D330013E07Rik 8 3177832 to 3181852 4020 unclassified gene RIKEN cDNA D330013E07 gene
Tssr80189 8 3200429 to 3200461 32 - TSS region transcription start site region 80189
Cpgi20015 8 3220787 to 3221609 822 CpG island CpG island 20015
Tssr76027 8 3221171 to 3221187 16 + TSS region transcription start site region 76027
Tssr80190 8 3232378 to 3232383 5 - TSS region transcription start site region 80190
Tssr80191 8 3240986 to 3240991 5 - TSS region transcription start site region 80191
Tssr76028 8 3248640 to 3248643 3 + TSS region transcription start site region 76028
Tssr80192 8 3252662 to 3252668 6 - TSS region transcription start site region 80192
Gm16180 8 3259704 to 3260641 937 + antisense lncRNA gene predicted gene 16180
Tssr80193 8 3269611 to 3269615 4 - TSS region transcription start site region 80193
Cpgi20016 8 3278976 to 3279870 894 CpG island CpG island 20016
Tssr80194 8 3279464 to 3279482 18 - TSS region transcription start site region 80194
Tssr80195 8 3279490 to 3279603 113 - TSS region transcription start site region 80195
Tssr80196 8 3279606 to 3279622 16 - TSS region transcription start site region 80196
Tssr80197 8 3279625 to 3279647 22 - TSS region transcription start site region 80197
Tssr76029 8 3311867 to 3311873 6 + TSS region transcription start site region 76029
Gm30369 8 3347990 to 3355909 7919 - lncRNA gene predicted gene, 30369
Tssr76030 8 3353321 to 3353332 11 + TSS region transcription start site region 76030
Tssr76031 8 3353338 to 3353352 14 + TSS region transcription start site region 76031
A430078G23Rik 8 3353415 to 3390299 36884 + protein coding gene RIKEN cDNA A430078G23 gene
Tssr76032 8 3353417 to 3353468 51 + TSS region transcription start site region 76032
Tssr76033 8 3353499 to 3353525 26 + TSS region transcription start site region 76033
Tssr76034 8 3353609 to 3353620 11 + TSS region transcription start site region 76034
Tssr76035 8 3353630 to 3353686 56 + TSS region transcription start site region 76035
Tssr76036 8 3353687 to 3353701 14 + TSS region transcription start site region 76036
Tssr2478 8 3353722 to 3353731 9 + TSS region transcription start site region 2478
Tssr80198 8 3354598 to 3354601 3 - TSS region transcription start site region 80198
Tssr76037 8 3354657 to 3354668 11 + TSS region transcription start site region 76037
Tssr80199 8 3355675 to 3355686 11 - TSS region transcription start site region 80199
Tssr76038 8 3360804 to 3360809 5 + TSS region transcription start site region 76038
Tssr76039 8 3360842 to 3360856 14 + TSS region transcription start site region 76039
Cpgi20017 8 3392839 to 3393352 513 CpG island CpG island 20017
Tssr76040 8 3392997 to 3393015 18 + TSS region transcription start site region 76040
Arhgef18 8 3393006 to 3456601 63595 + protein coding gene rho/rac guanine nucleotide exchange factor (GEF) 18
Tssr76041 8 3393018 to 3393053 35 + TSS region transcription start site region 76041
Gm46029 8 3425566 to 3427342 1776 - lncRNA gene predicted gene, 46029
Cpgi20018 8 3451750 to 3452198 448 CpG island CpG island 20018
Pex11g 8 3457105 to 3467680 10575 - protein coding gene peroxisomal biogenesis factor 11 gamma
Gm44775 8 3458039 to 3459494 1455 + unclassified gene predicted gene 44775
Cpgi20019 8 3467520 to 3467875 355 CpG island CpG island 20019
Tssr80200 8 3467617 to 3467662 45 - TSS region transcription start site region 80200
Tssr80201 8 3467707 to 3467714 7 - TSS region transcription start site region 80201
Tssr76042 8 3470813 to 3470823 10 + TSS region transcription start site region 76042
Tssr76043 8 3470841 to 3470858 17 + TSS region transcription start site region 76043
Tex45 8 3470862 to 3487181 16319 + protein coding gene testis expressed 45
Cpgi20020 8 3475843 to 3476476 633 CpG island CpG island 20020
Tssr76044 8 3482488 to 3482496 8 + TSS region transcription start site region 76044
Cpgi20021 8 3482549 to 3482759 210 CpG island CpG island 20021
Tssr76045 8 3485728 to 3485737 9 + TSS region transcription start site region 76045
Cpgi20022 8 3492765 to 3493639 874 CpG island CpG island 20022
Tssr76046 8 3493135 to 3493212 77 + TSS region transcription start site region 76046
Zfp358 8 3493138 to 3497208 4070 + protein coding gene zinc finger protein 358
Tssr2479 8 3493218 to 3493237 19 + TSS region transcription start site region 2479
Cpgi20023 8 3495591 to 3496690 1099 CpG island CpG island 20023
Cpgi20024 8 3500038 to 3501156 1118 CpG island CpG island 20024
Tssr76047 8 3500451 to 3500524 73 + TSS region transcription start site region 76047
Mcoln1 8 3500519 to 3515232 14713 + protein coding gene mucolipin 1
Tssr76048 8 3500530 to 3500548 18 + TSS region transcription start site region 76048
Tssr76049 8 3509160 to 3509173 13 + TSS region transcription start site region 76049
Cpgi20025 8 3515153 to 3516025 872 CpG island CpG island 20025
Tssr76050 8 3515378 to 3515397 19 + TSS region transcription start site region 76050
Pnpla6 8 3515384 to 3544267 28883 + protein coding gene patatin-like phospholipase domain containing 6
Tssr76051 8 3515402 to 3515418 16 + TSS region transcription start site region 76051
Tssr76052 8 3515635 to 3515641 6 + TSS region transcription start site region 76052
Cpgi20026 8 3516402 to 3517260 858 CpG island CpG island 20026
Tssr76053 8 3516839 to 3516903 64 + TSS region transcription start site region 76053
Tssr76054 8 3516918 to 3516932 14 + TSS region transcription start site region 76054
Tssr76055 8 3516939 to 3516951 12 + TSS region transcription start site region 76055
Tssr76056 8 3522580 to 3522591 11 + TSS region transcription start site region 76056
Cpgi20027 8 3532010 to 3532300 290 CpG island CpG island 20027
Tssr76057 8 3536818 to 3536825 7 + TSS region transcription start site region 76057