Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 8:27248879-27578892

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31 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Tssr80801 8 27250834 to 27250857 23 - TSS region transcription start site region 80801
Cpgi20220 8 27259938 to 27261627 1689 CpG island CpG island 20220
Tssr76776 8 27260321 to 27260332 11 + TSS region transcription start site region 76776
Eif4ebp1 8 27260327 to 27275656 15329 + protein coding gene eukaryotic translation initiation factor 4E binding protein 1
Tssr76777 8 27260332 to 27260370 38 + TSS region transcription start site region 76777
Tssr76778 8 27260395 to 27260418 23 + TSS region transcription start site region 76778
Tssr76779 8 27260429 to 27260462 33 + TSS region transcription start site region 76779
Tssr76780 8 27260497 to 27260509 12 + TSS region transcription start site region 76780
Tssr76781 8 27261423 to 27261433 10 + TSS region transcription start site region 76781
Tssr76782 8 27262746 to 27262760 14 + TSS region transcription start site region 76782
5430430B14Rik 8 27279441 to 27281070 1629 + unclassified gene RIKEN cDNA 5430430B14 gene
Gm18266 8 27294677 to 27295815 1138 + pseudogene predicted gene, 18266
Cpgi20221 8 27295999 to 27296233 234 CpG island CpG island 20221
Gm9731 8 27296055 to 27296801 746 + pseudogene predicted gene 9731
Tssr80802 8 27296283 to 27296297 14 - TSS region transcription start site region 80802
Tssr80803 8 27296300 to 27296314 14 - TSS region transcription start site region 80803
Tssr76783 8 27296324 to 27296356 32 + TSS region transcription start site region 76783
Tssr76784 8 27343981 to 27343992 11 + TSS region transcription start site region 76784
Tex24 8 27344394 to 27349188 4794 + protein coding gene testis expressed gene 24
Chrnb3 8 27368711 to 27399730 31019 + protein coding gene cholinergic receptor, nicotinic, beta polypeptide 3
Tssr76785 8 27368793 to 27368807 14 + TSS region transcription start site region 76785
Chrna6 8 27403212 to 27413944 10732 - protein coding gene cholinergic receptor, nicotinic, alpha polypeptide 6
Tssr80804 8 27413879 to 27413892 13 - TSS region transcription start site region 80804
Tssr80805 8 27413937 to 27413946 9 - TSS region transcription start site region 80805
Gm24410 8 27421324 to 27421430 106 - snRNA gene predicted gene, 24410
Gm45861 8 27447100 to 27620917 173817 + protein coding gene predicted gene 45861
Tssr76786 8 27447664 to 27447681 17 + TSS region transcription start site region 76786
Poteg 8 27447670 to 27495172 47502 + protein coding gene POTE ankyrin domain family, member G
Tssr76787 8 27447690 to 27447701 11 + TSS region transcription start site region 76787
Tssr76788 8 27447705 to 27447711 6 + TSS region transcription start site region 76788
Tssr76789 8 27471575 to 27471582 7 + TSS region transcription start site region 76789