Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 8:27144811-27204830

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23 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Rab11fip1 8 27138773 to 27174646 35873 - protein coding gene RAB11 family interacting protein 1 (class I)
4933416M07Rik 8 27142910 to 27146304 3394 + antisense lncRNA gene RIKEN cDNA 4933416M07 gene
Tssr80781 8 27154722 to 27154745 23 - TSS region transcription start site region 80781
Tssr80782 8 27156336 to 27156373 37 - TSS region transcription start site region 80782
Gm45267 8 27159828 to 27170691 10863 + antisense lncRNA gene predicted gene 45267
Cpgi20216 8 27160483 to 27160727 244 CpG island CpG island 20216
Tssr80783 8 27167086 to 27167090 4 - TSS region transcription start site region 80783
Gm45266 8 27168840 to 27171012 2172 - unclassified gene predicted gene 45266
Tssr80784 8 27168878 to 27168885 7 - TSS region transcription start site region 80784
Tssr76770 8 27172283 to 27172291 8 + TSS region transcription start site region 76770
Tssr76771 8 27172716 to 27172763 47 + TSS region transcription start site region 76771
Cpgi20217 8 27173980 to 27174932 952 CpG island CpG island 20217
Tssr80785 8 27174623 to 27174651 28 - TSS region transcription start site region 80785
Tssr76772 8 27174811 to 27174830 19 + TSS region transcription start site region 76772
Tssr76773 8 27175311 to 27175318 7 + TSS region transcription start site region 76773
Tssr76774 8 27175334 to 27175343 9 + TSS region transcription start site region 76774
Tssr2531 8 27175651 to 27175684 33 - TSS region transcription start site region 2531
Tssr76775 8 27177368 to 27177390 22 + TSS region transcription start site region 76775
Got1l1 8 27197459 to 27223828 26369 - protein coding gene glutamic-oxaloacetic transaminase 1-like 1
Tssr80786 8 27202478 to 27202481 3 - TSS region transcription start site region 80786
Tssr80787 8 27202524 to 27202535 11 - TSS region transcription start site region 80787
Tssr80788 8 27202542 to 27202557 15 - TSS region transcription start site region 80788
Tssr80789 8 27202567 to 27202581 14 - TSS region transcription start site region 80789