Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 8:27033147-27253158

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81 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Erlin2 8 27023266 to 27039437 16171 + protein coding gene ER lipid raft associated 2
Tssr76761 8 27038154 to 27038167 13 + TSS region transcription start site region 76761
Cpgi20210 8 27042367 to 27043198 831 CpG island CpG island 20210
Proscos 8 27042377 to 27043042 665 - antisense lncRNA gene proline synthetase co-transcribed, opposite strand
Plpbp 8 27042555 to 27056132 13577 + protein coding gene pyridoxal phosphate binding protein
Tssr76762 8 27042558 to 27042589 31 + TSS region transcription start site region 76762
Tssr76763 8 27042592 to 27042630 38 + TSS region transcription start site region 76763
Tssr80760 8 27042682 to 27042704 22 - TSS region transcription start site region 80760
Tssr80761 8 27042726 to 27042741 15 - TSS region transcription start site region 80761
Tssr80762 8 27042981 to 27043004 23 - TSS region transcription start site region 80762
Tssr80763 8 27043009 to 27043032 23 - TSS region transcription start site region 80763
Tssr80764 8 27043034 to 27043047 13 - TSS region transcription start site region 80764
Tssr80765 8 27043050 to 27043061 11 - TSS region transcription start site region 80765
Cpgi20211 8 27084951 to 27086668 1717 CpG island CpG island 20211
Tssr76764 8 27085520 to 27085580 60 + TSS region transcription start site region 76764
Adgra2 8 27085583 to 27123436 37853 + protein coding gene adhesion G protein-coupled receptor A2
Tssr76765 8 27085583 to 27085592 9 + TSS region transcription start site region 76765
Tssr76766 8 27085835 to 27085888 53 + TSS region transcription start site region 76766
Gm39151 8 27086269 to 27107449 21180 - lncRNA gene predicted gene, 39151
Cpgi20212 8 27086826 to 27087128 302 CpG island CpG island 20212
Tssr80766 8 27107442 to 27107480 38 - TSS region transcription start site region 80766
Cpgi20213 8 27120984 to 27122194 1210 CpG island CpG island 20213
Brf2 8 27123364 to 27128680 5316 - protein coding gene BRF2, RNA polymerase III transcription initiation factor 50kDa subunit
Cpgi20214 8 27128242 to 27128782 540 CpG island CpG island 20214
Tssr80767 8 27128615 to 27128687 72 - TSS region transcription start site region 80767
Rab11fip1 8 27138773 to 27174646 35873 - protein coding gene RAB11 family interacting protein 1 (class I)
Tssr80768 8 27140880 to 27140885 5 - TSS region transcription start site region 80768
Tssr80769 8 27141449 to 27141462 13 - TSS region transcription start site region 80769
Tssr76767 8 27141458 to 27141469 11 + TSS region transcription start site region 76767
Tssr80770 8 27141473 to 27141514 41 - TSS region transcription start site region 80770
Tssr80771 8 27141520 to 27141531 11 - TSS region transcription start site region 80771
Tssr80772 8 27141532 to 27141558 26 - TSS region transcription start site region 80772
Tssr80773 8 27141564 to 27141584 20 - TSS region transcription start site region 80773
Tssr80774 8 27141606 to 27141623 17 - TSS region transcription start site region 80774
Tssr80775 8 27141705 to 27141720 15 - TSS region transcription start site region 80775
Tssr80776 8 27141876 to 27141892 16 - TSS region transcription start site region 80776
Tssr80777 8 27141918 to 27141933 15 - TSS region transcription start site region 80777
Tssr80778 8 27142004 to 27142044 40 - TSS region transcription start site region 80778
Tssr80779 8 27142314 to 27142325 11 - TSS region transcription start site region 80779
Tssr80780 8 27142335 to 27142353 18 - TSS region transcription start site region 80780
4933416M07Rik 8 27142910 to 27146304 3394 + antisense lncRNA gene RIKEN cDNA 4933416M07 gene
Cpgi20215 8 27143085 to 27143378 293 CpG island CpG island 20215
Tssr76768 8 27143147 to 27143158 11 + TSS region transcription start site region 76768
Tssr76769 8 27143169 to 27143181 12 + TSS region transcription start site region 76769
Tssr80781 8 27154722 to 27154745 23 - TSS region transcription start site region 80781
Tssr80782 8 27156336 to 27156373 37 - TSS region transcription start site region 80782
Gm45267 8 27159828 to 27170691 10863 + antisense lncRNA gene predicted gene 45267
Cpgi20216 8 27160483 to 27160727 244 CpG island CpG island 20216
Tssr80783 8 27167086 to 27167090 4 - TSS region transcription start site region 80783
Gm45266 8 27168840 to 27171012 2172 - unclassified gene predicted gene 45266
Tssr80784 8 27168878 to 27168885 7 - TSS region transcription start site region 80784
Tssr76770 8 27172283 to 27172291 8 + TSS region transcription start site region 76770
Tssr76771 8 27172716 to 27172763 47 + TSS region transcription start site region 76771
Cpgi20217 8 27173980 to 27174932 952 CpG island CpG island 20217
Tssr80785 8 27174623 to 27174651 28 - TSS region transcription start site region 80785
Tssr76772 8 27174811 to 27174830 19 + TSS region transcription start site region 76772
Tssr76773 8 27175311 to 27175318 7 + TSS region transcription start site region 76773
Tssr76774 8 27175334 to 27175343 9 + TSS region transcription start site region 76774
Tssr2531 8 27175651 to 27175684 33 - TSS region transcription start site region 2531
Tssr76775 8 27177368 to 27177390 22 + TSS region transcription start site region 76775
Got1l1 8 27197459 to 27223828 26369 - protein coding gene glutamic-oxaloacetic transaminase 1-like 1
Tssr80786 8 27202478 to 27202481 3 - TSS region transcription start site region 80786
Tssr80787 8 27202524 to 27202535 11 - TSS region transcription start site region 80787
Tssr80788 8 27202542 to 27202557 15 - TSS region transcription start site region 80788
Tssr80789 8 27202567 to 27202581 14 - TSS region transcription start site region 80789
Cpgi20218 8 27206431 to 27206877 446 CpG island CpG island 20218
Tssr80790 8 27223784 to 27223798 14 - TSS region transcription start site region 80790
Tssr80791 8 27223814 to 27223833 19 - TSS region transcription start site region 80791
Adrb3 8 27225776 to 27230807 5031 - protein coding gene adrenergic receptor, beta 3
Cpgi20219 8 27227205 to 27228513 1308 CpG island CpG island 20219
Tssr80792 8 27227534 to 27227544 10 - TSS region transcription start site region 80792
Tssr80793 8 27228034 to 27228041 7 - TSS region transcription start site region 80793
Tssr80794 8 27228213 to 27228229 16 - TSS region transcription start site region 80794
Tssr80795 8 27228512 to 27228519 7 - TSS region transcription start site region 80795
Tssr80796 8 27228529 to 27228556 27 - TSS region transcription start site region 80796
Tssr80797 8 27228581 to 27228587 6 - TSS region transcription start site region 80797
Tssr80798 8 27230805 to 27230847 42 - TSS region transcription start site region 80798
Gm45470 8 27230949 to 27238559 7610 + antisense lncRNA gene predicted gene 45470
Tssr80799 8 27234424 to 27234458 34 - TSS region transcription start site region 80799
Tssr80800 8 27240289 to 27240292 3 - TSS region transcription start site region 80800
Tssr80801 8 27250834 to 27250857 23 - TSS region transcription start site region 80801