Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 8:27029951-27141668

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35 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Erlin2 8 27023266 to 27039437 16171 + protein coding gene ER lipid raft associated 2
Tssr2530 8 27031297 to 27031337 40 + TSS region transcription start site region 2530
Tssr76761 8 27038154 to 27038167 13 + TSS region transcription start site region 76761
Cpgi20210 8 27042367 to 27043198 831 CpG island CpG island 20210
Proscos 8 27042377 to 27043042 665 - antisense lncRNA gene proline synthetase co-transcribed, opposite strand
Plpbp 8 27042555 to 27056132 13577 + protein coding gene pyridoxal phosphate binding protein
Tssr76762 8 27042558 to 27042589 31 + TSS region transcription start site region 76762
Tssr76763 8 27042592 to 27042630 38 + TSS region transcription start site region 76763
Tssr80760 8 27042682 to 27042704 22 - TSS region transcription start site region 80760
Tssr80761 8 27042726 to 27042741 15 - TSS region transcription start site region 80761
Tssr80762 8 27042981 to 27043004 23 - TSS region transcription start site region 80762
Tssr80763 8 27043009 to 27043032 23 - TSS region transcription start site region 80763
Tssr80764 8 27043034 to 27043047 13 - TSS region transcription start site region 80764
Tssr80765 8 27043050 to 27043061 11 - TSS region transcription start site region 80765
Cpgi20211 8 27084951 to 27086668 1717 CpG island CpG island 20211
Tssr76764 8 27085520 to 27085580 60 + TSS region transcription start site region 76764
Tssr76765 8 27085583 to 27085592 9 + TSS region transcription start site region 76765
Adgra2 8 27085583 to 27123436 37853 + protein coding gene adhesion G protein-coupled receptor A2
Tssr76766 8 27085835 to 27085888 53 + TSS region transcription start site region 76766
Gm39151 8 27086269 to 27107449 21180 - lncRNA gene predicted gene, 39151
Cpgi20212 8 27086826 to 27087128 302 CpG island CpG island 20212
Tssr80766 8 27107442 to 27107480 38 - TSS region transcription start site region 80766
Cpgi20213 8 27120984 to 27122194 1210 CpG island CpG island 20213
Brf2 8 27123364 to 27128680 5316 - protein coding gene BRF2, RNA polymerase III transcription initiation factor 50kDa subunit
Cpgi20214 8 27128242 to 27128782 540 CpG island CpG island 20214
Tssr80767 8 27128615 to 27128687 72 - TSS region transcription start site region 80767
Rab11fip1 8 27138773 to 27174646 35873 - protein coding gene RAB11 family interacting protein 1 (class I)
Tssr80768 8 27140880 to 27140885 5 - TSS region transcription start site region 80768
Tssr80769 8 27141449 to 27141462 13 - TSS region transcription start site region 80769
Tssr76767 8 27141458 to 27141469 11 + TSS region transcription start site region 76767
Tssr80770 8 27141473 to 27141514 41 - TSS region transcription start site region 80770
Tssr80771 8 27141520 to 27141531 11 - TSS region transcription start site region 80771
Tssr80772 8 27141532 to 27141558 26 - TSS region transcription start site region 80772
Tssr80773 8 27141564 to 27141584 20 - TSS region transcription start site region 80773
Tssr80774 8 27141606 to 27141623 17 - TSS region transcription start site region 80774