Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 8:26821250-27173954

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87 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
2310008N11Rik 8 26814595 to 26824423 9828 - lincRNA gene RIKEN cDNA 2310008N11 gene
Gm29728 8 26823247 to 26823772 525 + pseudogene predicted gene, 29728
Tssr80758 8 26824418 to 26824430 12 - TSS region transcription start site region 80758
Tssr76742 8 26847053 to 26847058 5 + TSS region transcription start site region 76742
Gm39150 8 26960786 to 26977077 16291 - lncRNA gene predicted gene, 39150
Gm45572 8 26966434 to 26967474 1040 + lincRNA gene predicted gene 45572
Cpgi20207 8 26966489 to 26966716 227 CpG island CpG island 20207
Tssr76743 8 26975937 to 26975964 27 + TSS region transcription start site region 76743
Tssr76744 8 26976019 to 26976022 3 + TSS region transcription start site region 76744
Cpgi20208 8 26976269 to 26980076 3807 CpG island CpG island 20208
Tssr80759 8 26976948 to 26976986 38 - TSS region transcription start site region 80759
Tssr76745 8 26977106 to 26977127 21 + TSS region transcription start site region 76745
Tssr76746 8 26977137 to 26977162 25 + TSS region transcription start site region 76746
Tssr76747 8 26977302 to 26977344 42 + TSS region transcription start site region 76747
Zfp703 8 26977336 to 26981462 4126 + protein coding gene zinc finger protein 703
Tssr76748 8 26977370 to 26977398 28 + TSS region transcription start site region 76748
Gm45371 8 26977391 to 26980001 2610 - antisense lncRNA gene predicted gene 45371
Tssr76749 8 26977458 to 26977490 32 + TSS region transcription start site region 76749
Tssr76750 8 26978150 to 26978190 40 + TSS region transcription start site region 76750
Tssr76751 8 26978611 to 26978618 7 + TSS region transcription start site region 76751
Tssr76752 8 26978769 to 26978795 26 + TSS region transcription start site region 76752
Tssr76753 8 26979224 to 26979250 26 + TSS region transcription start site region 76753
Tssr76754 8 26979942 to 26979945 3 + TSS region transcription start site region 76754
Tssr76755 8 26980112 to 26980127 15 + TSS region transcription start site region 76755
Tssr76756 8 26980470 to 26980481 11 + TSS region transcription start site region 76756
Gm45370 8 26996250 to 26998954 2704 + lincRNA gene predicted gene 45370
Gm32389 8 27008467 to 27012903 4436 + lincRNA gene predicted gene, 32389
Gm19164 8 27019466 to 27019990 524 - pseudogene predicted gene, 19164
Tssr76757 8 27022073 to 27022079 6 + TSS region transcription start site region 76757
Erlin2 8 27023266 to 27039437 16171 + protein coding gene ER lipid raft associated 2
Tssr76758 8 27023364 to 27023380 16 + TSS region transcription start site region 76758
Cpgi20209 8 27023367 to 27024277 910 CpG island CpG island 20209
Tssr76759 8 27023793 to 27023810 17 + TSS region transcription start site region 76759
Tssr76760 8 27023812 to 27023937 125 + TSS region transcription start site region 76760
Tssr2530 8 27031297 to 27031337 40 + TSS region transcription start site region 2530
Tssr76761 8 27038154 to 27038167 13 + TSS region transcription start site region 76761
Cpgi20210 8 27042367 to 27043198 831 CpG island CpG island 20210
Proscos 8 27042377 to 27043042 665 - antisense lncRNA gene proline synthetase co-transcribed, opposite strand
Plpbp 8 27042555 to 27056132 13577 + protein coding gene pyridoxal phosphate binding protein
Tssr76762 8 27042558 to 27042589 31 + TSS region transcription start site region 76762
Tssr76763 8 27042592 to 27042630 38 + TSS region transcription start site region 76763
Tssr80760 8 27042682 to 27042704 22 - TSS region transcription start site region 80760
Tssr80761 8 27042726 to 27042741 15 - TSS region transcription start site region 80761
Tssr80762 8 27042981 to 27043004 23 - TSS region transcription start site region 80762
Tssr80763 8 27043009 to 27043032 23 - TSS region transcription start site region 80763
Tssr80764 8 27043034 to 27043047 13 - TSS region transcription start site region 80764
Tssr80765 8 27043050 to 27043061 11 - TSS region transcription start site region 80765
Cpgi20211 8 27084951 to 27086668 1717 CpG island CpG island 20211
Tssr76764 8 27085520 to 27085580 60 + TSS region transcription start site region 76764
Tssr76765 8 27085583 to 27085592 9 + TSS region transcription start site region 76765
Adgra2 8 27085583 to 27123436 37853 + protein coding gene adhesion G protein-coupled receptor A2
Tssr76766 8 27085835 to 27085888 53 + TSS region transcription start site region 76766
Gm39151 8 27086269 to 27107449 21180 - lncRNA gene predicted gene, 39151
Cpgi20212 8 27086826 to 27087128 302 CpG island CpG island 20212
Tssr80766 8 27107442 to 27107480 38 - TSS region transcription start site region 80766
Cpgi20213 8 27120984 to 27122194 1210 CpG island CpG island 20213
Brf2 8 27123364 to 27128680 5316 - protein coding gene BRF2, RNA polymerase III transcription initiation factor 50kDa subunit
Cpgi20214 8 27128242 to 27128782 540 CpG island CpG island 20214
Tssr80767 8 27128615 to 27128687 72 - TSS region transcription start site region 80767
Rab11fip1 8 27138773 to 27174646 35873 - protein coding gene RAB11 family interacting protein 1 (class I)
Tssr80768 8 27140880 to 27140885 5 - TSS region transcription start site region 80768
Tssr80769 8 27141449 to 27141462 13 - TSS region transcription start site region 80769
Tssr76767 8 27141458 to 27141469 11 + TSS region transcription start site region 76767
Tssr80770 8 27141473 to 27141514 41 - TSS region transcription start site region 80770
Tssr80771 8 27141520 to 27141531 11 - TSS region transcription start site region 80771
Tssr80772 8 27141532 to 27141558 26 - TSS region transcription start site region 80772
Tssr80773 8 27141564 to 27141584 20 - TSS region transcription start site region 80773
Tssr80774 8 27141606 to 27141623 17 - TSS region transcription start site region 80774
Tssr80775 8 27141705 to 27141720 15 - TSS region transcription start site region 80775
Tssr80776 8 27141876 to 27141892 16 - TSS region transcription start site region 80776
Tssr80777 8 27141918 to 27141933 15 - TSS region transcription start site region 80777
Tssr80778 8 27142004 to 27142044 40 - TSS region transcription start site region 80778
Tssr80779 8 27142314 to 27142325 11 - TSS region transcription start site region 80779
Tssr80780 8 27142335 to 27142353 18 - TSS region transcription start site region 80780
4933416M07Rik 8 27142910 to 27146304 3394 + antisense lncRNA gene RIKEN cDNA 4933416M07 gene
Cpgi20215 8 27143085 to 27143378 293 CpG island CpG island 20215
Tssr76768 8 27143147 to 27143158 11 + TSS region transcription start site region 76768
Tssr76769 8 27143169 to 27143181 12 + TSS region transcription start site region 76769
Tssr80781 8 27154722 to 27154745 23 - TSS region transcription start site region 80781
Tssr80782 8 27156336 to 27156373 37 - TSS region transcription start site region 80782
Gm45267 8 27159828 to 27170691 10863 + antisense lncRNA gene predicted gene 45267
Cpgi20216 8 27160483 to 27160727 244 CpG island CpG island 20216
Tssr80783 8 27167086 to 27167090 4 - TSS region transcription start site region 80783
Gm45266 8 27168840 to 27171012 2172 - unclassified gene predicted gene 45266
Tssr80784 8 27168878 to 27168885 7 - TSS region transcription start site region 80784
Tssr76770 8 27172283 to 27172291 8 + TSS region transcription start site region 76770
Tssr76771 8 27172716 to 27172763 47 + TSS region transcription start site region 76771