Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 8:26033829-26845492

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57 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Hook3 8 26021421 to 26119224 97803 - protein coding gene hook microtubule tethering protein 3
5730564C23Rik 8 26051606 to 26052545 939 unclassified gene RIKEN cDNA 5730564C23 gene
Tssr80751 8 26058061 to 26058100 39 - TSS region transcription start site region 80751
Tssr80752 8 26059375 to 26059381 6 - TSS region transcription start site region 80752
Gm45413 8 26062515 to 26066052 3537 - unclassified gene predicted gene 45413
Tssr76734 8 26082603 to 26082625 22 + TSS region transcription start site region 76734
1700047A11Rik 8 26082609 to 26096520 13911 + antisense lncRNA gene RIKEN cDNA 1700047A11 gene
Tssr80753 8 26089873 to 26089883 10 - TSS region transcription start site region 80753
Gm18364 8 26103616 to 26104228 612 + pseudogene predicted gene, 18364
Cpgi20200 8 26118475 to 26120031 1556 CpG island CpG island 20200
Tssr80754 8 26119125 to 26119233 108 - TSS region transcription start site region 80754
Tssr80755 8 26119292 to 26119303 11 - TSS region transcription start site region 80755
Tssr76735 8 26119361 to 26119368 7 + TSS region transcription start site region 76735
Rnf170 8 26119365 to 26143874 24509 + protein coding gene ring finger protein 170
Tssr76736 8 26119461 to 26119539 78 + TSS region transcription start site region 76736
Gm45692 8 26119534 to 26160819 41285 + protein coding gene predicted gene 45692
Tssr76737 8 26119611 to 26119682 71 + TSS region transcription start site region 76737
Gm45251 8 26131178 to 26132642 1464 - unclassified gene predicted gene 45251
Gm45250 8 26151888 to 26155479 3591 - lincRNA gene predicted gene 45250
Cpgi20201 8 26157832 to 26159191 1359 CpG island CpG island 20201
Tssr80756 8 26158024 to 26158058 34 - TSS region transcription start site region 80756
Thap1 8 26158169 to 26164151 5982 + protein coding gene THAP domain containing, apoptosis associated protein 1
Tssr76738 8 26158186 to 26158252 66 + TSS region transcription start site region 76738
Tssr80757 8 26158545 to 26158580 35 - TSS region transcription start site region 80757
Cpgi20202 8 26184874 to 26185078 204 CpG island CpG island 20202
Gm44299 8 26219461 to 26219549 88 + miRNA gene predicted gene, 44299
Gm22227 8 26240150 to 26240408 258 - unclassified non-coding RNA gene predicted gene, 22227
Gm45305 8 26242724 to 26244051 1327 + lincRNA gene predicted gene 45305
Cpgi20203 8 26258561 to 26258850 289 CpG island CpG island 20203
Tssr76739 8 26266857 to 26266894 37 + TSS region transcription start site region 76739
Gm31727 8 26266977 to 26273555 6578 + lincRNA gene predicted gene, 31727
Gm31784 8 26298352 to 26312334 13982 - lincRNA gene predicted gene, 31784
Gm45307 8 26298634 to 26354163 55529 + lincRNA gene predicted gene 45307
Gm31843 8 26381686 to 26389138 7452 + lncRNA gene predicted gene, 31843
Gm39148 8 26386110 to 26389066 2956 - lncRNA gene predicted gene, 39148
Gm31898 8 26428281 to 26435713 7432 - lincRNA gene predicted gene, 31898
Gm45580 8 26438829 to 26440492 1663 + lincRNA gene predicted gene 45580
D8Mit290 8 26448465 to 26448582 117 DNA segment DNA Segment, Chr 8, Massachusetts Institute of Technology 290
Gm31983 8 26452793 to 26468559 15766 - lincRNA gene predicted gene, 31983
Cpgi20204 8 26509929 to 26510247 318 CpG island CpG island 20204
Cpgi20205 8 26533997 to 26534287 290 CpG island CpG island 20205
D8Mit356 8 26552986 to 26553235 249 DNA segment DNA Segment, Chr 8, Massachusetts Institute of Technology 356
Gm39149 8 26560461 to 26579802 19341 - lincRNA gene predicted gene, 39149
Gm32050 8 26626744 to 26627480 736 - lincRNA gene predicted gene, 32050
Gm45584 8 26637675 to 26639952 2277 + lincRNA gene predicted gene 45584
Gm32098 8 26665893 to 26668306 2413 - lincRNA gene predicted gene, 32098
Tssr76740 8 26698888 to 26698925 37 + TSS region transcription start site region 76740
Tssr2529 8 26717318 to 26717321 3 + TSS region transcription start site region 2529
D8Mit223 8 26719787 to 26719909 122 DNA segment DNA segment, Chr 8, Massachusetts Institute of Technology 223
Tssr76741 8 26724486 to 26724491 5 + TSS region transcription start site region 76741
Gm45646 8 26745929 to 26760561 14632 - lincRNA gene predicted gene 45646
Gm46067 8 26768747 to 26770539 1792 - lncRNA gene predicted gene, 46067
Gm45647 8 26780315 to 26780509 194 + pseudogene predicted gene 45647
Cpgi20206 8 26780580 to 26780928 348 CpG island CpG island 20206
2310008N11Rik 8 26814595 to 26824423 9828 - lincRNA gene RIKEN cDNA 2310008N11 gene
Gm29728 8 26823247 to 26823772 525 + pseudogene predicted gene, 29728
Tssr80758 8 26824418 to 26824430 12 - TSS region transcription start site region 80758