Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 8:25982515-26146052

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31 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Pomk 8 25980604 to 25994121 13517 - protein coding gene protein-O-mannose kinase
Cpgi20197 8 25986100 to 25986526 426 CpG island CpG island 20197
Tssr80746 8 25990092 to 25990115 23 - TSS region transcription start site region 80746
Gm31402 8 25992654 to 25998229 5575 + lncRNA gene predicted gene, 31402
Cpgi20198 8 25993783 to 25994392 609 CpG island CpG island 20198
Tssr80747 8 25994103 to 25994144 41 - TSS region transcription start site region 80747
Fnta 8 25998722 to 26015601 16879 - protein coding gene farnesyltransferase, CAAX box, alpha
D8Rck2 8 25999008 to 25999227 219 DNA segment DNA segment, Chr 8, Rockefeller University 2
Tssr80748 8 26001970 to 26001987 17 - TSS region transcription start site region 80748
Cpgi20199 8 26014836 to 26015769 933 CpG island CpG island 20199
Tssr80749 8 26015577 to 26015626 49 - TSS region transcription start site region 80749
Hook3 8 26021421 to 26119224 97803 - protein coding gene hook microtubule tethering protein 3
Gm45411 8 26023410 to 26032253 8843 + antisense lncRNA gene predicted gene 45411
Tssr80750 8 26026700 to 26026705 5 - TSS region transcription start site region 80750
5730564C23Rik 8 26051606 to 26052545 939 unclassified gene RIKEN cDNA 5730564C23 gene
Tssr80751 8 26058061 to 26058100 39 - TSS region transcription start site region 80751
Tssr80752 8 26059375 to 26059381 6 - TSS region transcription start site region 80752
Gm45413 8 26062515 to 26066052 3537 - unclassified gene predicted gene 45413
Tssr76734 8 26082603 to 26082625 22 + TSS region transcription start site region 76734
1700047A11Rik 8 26082609 to 26096520 13911 + antisense lncRNA gene RIKEN cDNA 1700047A11 gene
Tssr80753 8 26089873 to 26089883 10 - TSS region transcription start site region 80753
Gm18364 8 26103616 to 26104228 612 + pseudogene predicted gene, 18364
Cpgi20200 8 26118475 to 26120031 1556 CpG island CpG island 20200
Tssr80754 8 26119125 to 26119233 108 - TSS region transcription start site region 80754
Tssr80755 8 26119292 to 26119303 11 - TSS region transcription start site region 80755
Tssr76735 8 26119361 to 26119368 7 + TSS region transcription start site region 76735
Rnf170 8 26119365 to 26143874 24509 + protein coding gene ring finger protein 170
Tssr76736 8 26119461 to 26119539 78 + TSS region transcription start site region 76736
Gm45692 8 26119534 to 26160819 41285 + protein coding gene predicted gene 45692
Tssr76737 8 26119611 to 26119682 71 + TSS region transcription start site region 76737
Gm45251 8 26131178 to 26132642 1464 - unclassified gene predicted gene 45251