MPD: Genes and genomic regions

Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g. 17:44-45 ..or.. X:22500000-23000000

Click here to work with the entire chromosomal region 8:25647369-25728196

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18 genes found.

Gene symbol	Chromo- some	Coordinates (bp, mm10)	Size (bp)	Strand	Feature Type	Gene name
Nsd3	8	25601601 to 25719667	118066	+	protein coding gene	nuclear receptor binding SET domain protein 3
Tssr76701	8	25649397 to 25649415	18	+	TSS region	transcription start site region 76701
Tssr80724	8	25661474 to 25661480	6	-	TSS region	transcription start site region 80724
Tssr76702	8	25673979 to 25673991	12	+	TSS region	transcription start site region 76702
Tssr76703	8	25677002 to 25677007	5	+	TSS region	transcription start site region 76703
Gm23094	8	25678950 to 25679271	321	+	unclassified non-coding RNA gene	predicted gene, 23094
Gm45343	8	25687369 to 25688196	827	+	unclassified gene	predicted gene 45343
Tssr76704	8	25687684 to 25687705	21	+	TSS region	transcription start site region 76704
Gm45342	8	25692146 to 25693508	1362	+	unclassified gene	predicted gene 45342
Tssr76705	8	25716572 to 25716584	12	+	TSS region	transcription start site region 76705
Cpgi20190	8	25719899 to 25720697	798		CpG island	CpG island 20190
Plpp5	8	25720037 to 25724887	4850	+	protein coding gene	phospholipid phosphatase 5
Tssr76706	8	25720042 to 25720053	11	+	TSS region	transcription start site region 76706
Tssr76707	8	25720054 to 25720099	45	+	TSS region	transcription start site region 76707
Tssr76708	8	25720135 to 25720148	13	+	TSS region	transcription start site region 76708
Tssr76709	8	25720259 to 25720304	45	+	TSS region	transcription start site region 76709
Tssr76710	8	25720459 to 25720474	15	+	TSS region	transcription start site region 76710
Ddhd2	8	25725324 to 25754407	29083	-	protein coding gene	DDHD domain containing 2