Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 8:25034572-25228208

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60 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Htra4 8 25024929 to 25038962 14033 - protein coding gene HtrA serine peptidase 4
Gm16933 8 25037052 to 25041892 4840 + lincRNA gene predicted gene, 16933
Cpgi20177 8 25037918 to 25039128 1210 CpG island CpG island 20177
Tssr80668 8 25038875 to 25038921 46 - TSS region transcription start site region 80668
Tssr80669 8 25038956 to 25038974 18 - TSS region transcription start site region 80669
Plekha2 8 25039144 to 25102376 63232 - protein coding gene pleckstrin homology domain-containing, family A (phosphoinositide binding specific) member 2
Tssr80670 8 25052842 to 25052848 6 - TSS region transcription start site region 80670
Tssr80671 8 25054871 to 25054884 13 - TSS region transcription start site region 80671
Tssr80672 8 25067921 to 25067935 14 - TSS region transcription start site region 80672
Tssr2523 8 25068146 to 25068159 13 + TSS region transcription start site region 2523
Cpgi20178 8 25068162 to 25068420 258 CpG island CpG island 20178
Tssr76665 8 25068459 to 25068470 11 + TSS region transcription start site region 76665
Tssr76666 8 25068488 to 25068496 8 + TSS region transcription start site region 76666
Tssr76667 8 25068581 to 25068616 35 + TSS region transcription start site region 76667
Tssr80673 8 25087533 to 25087538 5 - TSS region transcription start site region 80673
Tssr80674 8 25088514 to 25088545 31 - TSS region transcription start site region 80674
Tssr80675 8 25091341 to 25091351 10 - TSS region transcription start site region 80675
Tssr80676 8 25091364 to 25091372 8 - TSS region transcription start site region 80676
Tssr76668 8 25101072 to 25101104 32 + TSS region transcription start site region 76668
5830408C22Rik 8 25101216 to 25109986 8770 + unclassified non-coding RNA gene RIKEN cDNA 5830408C22 gene
Cpgi20179 8 25101548 to 25103172 1624 CpG island CpG island 20179
Tssr80677 8 25101599 to 25101608 9 - TSS region transcription start site region 80677
Tssr2524 8 25101606 to 25101627 21 + TSS region transcription start site region 2524
Tssr80678 8 25101702 to 25101713 11 - TSS region transcription start site region 80678
Tssr80679 8 25101734 to 25101792 58 - TSS region transcription start site region 80679
Tssr76669 8 25101870 to 25101886 16 + TSS region transcription start site region 76669
Tssr76670 8 25101914 to 25101953 39 + TSS region transcription start site region 76670
Tssr80680 8 25102107 to 25102169 62 - TSS region transcription start site region 80680
Tssr80681 8 25102179 to 25102194 15 - TSS region transcription start site region 80681
Tssr80682 8 25102369 to 25102388 19 - TSS region transcription start site region 80682
Tssr80683 8 25102543 to 25102570 27 - TSS region transcription start site region 80683
Tssr80684 8 25103014 to 25103030 16 - TSS region transcription start site region 80684
Tssr76671 8 25103485 to 25103489 4 + TSS region transcription start site region 76671
Gm45745 8 25103489 to 25104668 1179 - unclassified gene predicted gene 45745
Tssr80685 8 25104661 to 25104689 28 - TSS region transcription start site region 80685
Tssr80686 8 25104700 to 25104709 9 - TSS region transcription start site region 80686
Tssr80687 8 25104791 to 25104806 15 - TSS region transcription start site region 80687
Tssr76672 8 25118240 to 25118282 42 + TSS region transcription start site region 76672
Tssr80688 8 25119079 to 25119095 16 - TSS region transcription start site region 80688
Gm39143 8 25129572 to 25133208 3636 + lncRNA gene predicted gene, 39143
Tacc1 8 25154552 to 25256583 102031 - protein coding gene transforming, acidic coiled-coil containing protein 1
Tssr80689 8 25158025 to 25158040 15 - TSS region transcription start site region 80689
Tssr80690 8 25158147 to 25158157 10 - TSS region transcription start site region 80690
Mir8108 8 25159125 to 25159233 108 - miRNA gene microRNA 8108
Tssr80691 8 25159659 to 25159681 22 - TSS region transcription start site region 80691
Tssr80692 8 25169261 to 25169276 15 - TSS region transcription start site region 80692
Tssr76673 8 25198851 to 25198856 5 + TSS region transcription start site region 76673
Tssr76674 8 25200458 to 25200463 5 + TSS region transcription start site region 76674
Cpgi20180 8 25200555 to 25202075 1520 CpG island CpG island 20180
Tssr80693 8 25201315 to 25201344 29 - TSS region transcription start site region 80693
Tssr80694 8 25201349 to 25201459 110 - TSS region transcription start site region 80694
Tssr76675 8 25201454 to 25201457 3 + TSS region transcription start site region 76675
Tssr80695 8 25201536 to 25201603 67 - TSS region transcription start site region 80695
Tssr80696 8 25201785 to 25201794 9 - TSS region transcription start site region 80696
Tssr80697 8 25202439 to 25202446 7 - TSS region transcription start site region 80697
Tssr80698 8 25203819 to 25203843 24 - TSS region transcription start site region 80698
Tssr80699 8 25203858 to 25203876 18 - TSS region transcription start site region 80699
Tssr80700 8 25203894 to 25203923 29 - TSS region transcription start site region 80700
D8Mit287 8 25204925 to 25205049 124 DNA segment DNA Segment, Chr 8, Massachusetts Institute of Technology 287
Tssr80701 8 25205848 to 25205859 11 - TSS region transcription start site region 80701