Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 8:24038140-24968144

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75 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Zmat4 8 23647388 to 24063117 415729 + protein coding gene zinc finger, matrin type 4
Tssr76649 8 24044474 to 24044488 14 + TSS region transcription start site region 76649
Tssr76650 8 24044518 to 24044536 18 + TSS region transcription start site region 76650
A730045E13Rik 8 24173904 to 24185568 11664 + lincRNA gene RIKEN cDNA A730045E13 gene
Cpgi20172 8 24180797 to 24180964 167 CpG island CpG island 20172
Gm45163 8 24220510 to 24230146 9636 + lincRNA gene predicted gene 45163
Gm45164 8 24353944 to 24359436 5492 - lincRNA gene predicted gene 45164
Gm30633 8 24382131 to 24391067 8936 + lncRNA gene predicted gene, 30633
Tssr76651 8 24395791 to 24395794 3 + TSS region transcription start site region 76651
Tssr2517 8 24399222 to 24399226 4 + TSS region transcription start site region 2517
Gm30692 8 24412331 to 24416936 4605 + lincRNA gene predicted gene, 30692
Tssr76652 8 24413094 to 24413101 7 + TSS region transcription start site region 76652
Tssr76653 8 24419599 to 24419600 1 + TSS region transcription start site region 76653
Gm26714 8 24422404 to 24440008 17604 + antisense lncRNA gene predicted gene, 26714
Gm30757 8 24429438 to 24431124 1686 - lncRNA gene predicted gene, 30757
Tcim 8 24437616 to 24438946 1330 - protein coding gene transcriptional and immune response regulator
Tssr80636 8 24438937 to 24438952 15 - TSS region transcription start site region 80636
Gm30845 8 24440880 to 24447864 6984 - lncRNA gene predicted gene, 30845
Gm44620 8 24447097 to 24449983 2886 + unclassified gene predicted gene 44620
Tssr76654 8 24480062 to 24480108 46 + TSS region transcription start site region 76654
Ap8q 8 24494173 to 24494326 153 QTL alcohol preference 8 QTL
D8Mit95 8 24494173 to 24494326 153 DNA segment DNA segment, Chr 8, Massachusetts Institute of Technology 95
Tssr76655 8 24503086 to 24503087 1 + TSS region transcription start site region 76655
Tssr76656 8 24503093 to 24503106 13 + TSS region transcription start site region 76656
Tssr76657 8 24503140 to 24503144 4 + TSS region transcription start site region 76657
9130214F15Rik 8 24506430 to 24508082 1652 + lncRNA gene RIKEN cDNA 9130214F15 gene
Ido2 8 24531892 to 24576333 44441 - protein coding gene indoleamine 2,3-dioxygenase 2
Tssr80637 8 24554320 to 24554334 14 - TSS region transcription start site region 80637
Tssr80638 8 24571210 to 24571218 8 - TSS region transcription start site region 80638
Tssr80639 8 24576276 to 24576283 7 - TSS region transcription start site region 80639
Tssr80640 8 24576297 to 24576368 71 - TSS region transcription start site region 80640
Ido1 8 24584133 to 24596952 12819 - protein coding gene indoleamine 2,3-dioxygenase 1
Tssr80641 8 24585350 to 24585374 24 - TSS region transcription start site region 80641
Cpgi20173 8 24595515 to 24595965 450 CpG island CpG island 20173
Tssr80642 8 24595602 to 24595610 8 - TSS region transcription start site region 80642
Tssr80643 8 24595611 to 24595617 6 - TSS region transcription start site region 80643
Tssr80644 8 24595634 to 24595671 37 - TSS region transcription start site region 80644
Tssr76658 8 24595777 to 24595782 5 + TSS region transcription start site region 76658
Tssr80645 8 24596960 to 24596976 16 - TSS region transcription start site region 80645
Adam18 8 24602246 to 24674755 72509 - protein coding gene a disintegrin and metallopeptidase domain 18
D8Mit3 8 24613185 to 24613356 171 DNA segment DNA segment, Chr 8, Massachusetts Institute of Technology 3
Sluc20 8 24613185 to 24613356 171 QTL susceptibility to lung cancer 20
Cypr7 8 24613185 to 24613356 171 QTL cytokine production 7
Eae24 8 24613185 to 24613356 171 QTL experimental allergic encephalomyelitis susceptibility 24
Cpgi20174 8 24674618 to 24674874 256 CpG island CpG island 20174
Tssr80646 8 24674707 to 24674740 33 - TSS region transcription start site region 80646
Tssr80647 8 24674751 to 24674759 8 - TSS region transcription start site region 80647
Adam3 8 24677225 to 24725852 48627 - protein coding gene a disintegrin and metallopeptidase domain 3 (cyritestin)
Gm26208 8 24680814 to 24680937 123 + snoRNA gene predicted gene, 26208
Gm45528 8 24711406 to 24714550 3144 + unclassified gene predicted gene 45528
Tssr2518 8 24725741 to 24725748 7 - TSS region transcription start site region 2518
Tssr80648 8 24725762 to 24725818 56 - TSS region transcription start site region 80648
Tssr2519 8 24725840 to 24725861 21 - TSS region transcription start site region 2519
Tssr76659 8 24725968 to 24725999 31 + TSS region transcription start site region 76659
Tssr80649 8 24726019 to 24726030 11 - TSS region transcription start site region 80649
Adam5 8 24727093 to 24824369 97276 - protein coding gene a disintegrin and metallopeptidase domain 5
Tssr80650 8 24746762 to 24746776 14 - TSS region transcription start site region 80650
Tssr2520 8 24779521 to 24779522 1 + TSS region transcription start site region 2520
Tssr80651 8 24814095 to 24814104 9 - TSS region transcription start site region 80651
Tssr80652 8 24814118 to 24814126 8 - TSS region transcription start site region 80652
Tssr80653 8 24818527 to 24818536 9 - TSS region transcription start site region 80653
Tssr80654 8 24818547 to 24818556 9 - TSS region transcription start site region 80654
Tssr76660 8 24818969 to 24818971 2 + TSS region transcription start site region 76660
Tssr2521 8 24823974 to 24823978 4 - TSS region transcription start site region 2521
Tssr2522 8 24823979 to 24823986 7 - TSS region transcription start site region 2522
Tssr80655 8 24824016 to 24824045 29 - TSS region transcription start site region 80655
Tssr80656 8 24824049 to 24824059 10 - TSS region transcription start site region 80656
Adam32 8 24836140 to 24948804 112664 - protein coding gene a disintegrin and metallopeptidase domain 32
Tssr80657 8 24903368 to 24903373 5 - TSS region transcription start site region 80657
Gm23898 8 24938300 to 24938402 102 + snRNA gene predicted gene, 23898
Cpgi20175 8 24948691 to 24948901 210 CpG island CpG island 20175
Tssr80658 8 24948771 to 24948829 58 - TSS region transcription start site region 80658
Adam9 8 24949611 to 25016927 67316 - protein coding gene a disintegrin and metallopeptidase domain 9 (meltrin gamma)
Tssr80659 8 24950840 to 24950844 4 - TSS region transcription start site region 80659
Tssr80660 8 24955229 to 24955235 6 - TSS region transcription start site region 80660