Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 8:23445507-24245785

Filter by:
31 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Sfrp1 8 23411502 to 23449632 38130 + protein coding gene secreted frizzled-related protein 1
Tssr76637 8 23446572 to 23446581 9 + TSS region transcription start site region 76637
Tssr76638 8 23446702 to 23446717 15 + TSS region transcription start site region 76638
Tssr76639 8 23446751 to 23446754 3 + TSS region transcription start site region 76639
Tssr76640 8 23446869 to 23446881 12 + TSS region transcription start site region 76640
Tssr76641 8 23446889 to 23446909 20 + TSS region transcription start site region 76641
Tssr76642 8 23446912 to 23446932 20 + TSS region transcription start site region 76642
Tssr76643 8 23446942 to 23446969 27 + TSS region transcription start site region 76643
Tssr76644 8 23446973 to 23446993 20 + TSS region transcription start site region 76644
Tssr76645 8 23448521 to 23448523 2 + TSS region transcription start site region 76645
4930413E20Rik 8 23534472 to 23535739 1267 + lncRNA gene RIKEN cDNA 4930413E20 gene
Tssr76646 8 23535193 to 23535202 9 + TSS region transcription start site region 76646
D8Dcr6 8 23590956 to 23591051 95 DNA segment DNA Segment, Chr 8, Derry C. Roopenian 6
Cpgi20169 8 23629977 to 23630216 239 CpG island CpG island 20169
Cpgi20170 8 23633867 to 23634046 179 CpG island CpG island 20170
Gm30471 8 23635080 to 23648505 13425 - lncRNA gene predicted gene, 30471
Zmat4 8 23647388 to 24063117 415729 + protein coding gene zinc finger, matrin type 4
Tssr80635 8 23648516 to 23648544 28 - TSS region transcription start site region 80635
Cpgi20171 8 23669514 to 23669860 346 CpG island CpG island 20171
Tssr76647 8 23669653 to 23669671 18 + TSS region transcription start site region 76647
Gm45165 8 23696005 to 23697635 1630 + unclassified gene predicted gene 45165
Gm45166 8 23752083 to 23752765 682 - unclassified gene predicted gene 45166
Tssr76648 8 23776584 to 23776608 24 + TSS region transcription start site region 76648
D8Mit143 8 23845507 to 23845785 278 DNA segment DNA segment, Chr 8, Massachusetts Institute of Technology 143
D8Mit222 8 24007500 to 24007638 138 DNA segment DNA segment, Chr 8, Massachusetts Institute of Technology 222
D8Mit23 8 24020007 to 24020260 253 DNA segment DNA segment, Chr 8, Massachusetts Institute of Technology 23
Tssr76649 8 24044474 to 24044488 14 + TSS region transcription start site region 76649
Tssr76650 8 24044518 to 24044536 18 + TSS region transcription start site region 76650
A730045E13Rik 8 24173904 to 24185568 11664 + lincRNA gene RIKEN cDNA A730045E13 gene
Cpgi20172 8 24180797 to 24180964 167 CpG island CpG island 20172
Gm45163 8 24220510 to 24230146 9636 + lincRNA gene predicted gene 45163