Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 8:22773224-23103237

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50 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Plat 8 22757727 to 22782844 25117 + protein coding gene plasminogen activator, tissue
Tssr80610 8 22783444 to 22783447 3 - TSS region transcription start site region 80610
Ap3m2 8 22787354 to 22805622 18268 - protein coding gene adaptor-related protein complex 3, mu 2 subunit
D8Dcr5 8 22802019 to 22802114 95 DNA segment DNA Segment, Chr 8, Derry C. Roopenian 5
Tssr80611 8 22803883 to 22803892 9 - TSS region transcription start site region 80611
Cpgi20156 8 22805307 to 22805903 596 CpG island CpG island 20156
Tssr80612 8 22805596 to 22805649 53 - TSS region transcription start site region 80612
1700041G16Rik 8 22805766 to 22809537 3771 + lincRNA gene RIKEN cDNA 1700041G16 gene
Cpgi20157 8 22807857 to 22808592 735 CpG island CpG island 20157
Gm46036 8 22811025 to 22861510 50485 - lncRNA gene predicted gene, 46036
Gm24735 8 22822428 to 22822545 117 - snRNA gene predicted gene, 24735
Cpgi20158 8 22858495 to 22860592 2097 CpG island CpG island 20158
Tssr80613 8 22859258 to 22859266 8 - TSS region transcription start site region 80613
Tssr76592 8 22859528 to 22859554 26 + TSS region transcription start site region 76592
Kat6a 8 22859535 to 22943259 83724 + protein coding gene K(lysine) acetyltransferase 6A
Gm18675 8 22871588 to 22872171 583 - pseudogene predicted gene, 18675
Cpgi20159 8 22871973 to 22872170 197 CpG island CpG island 20159
Gm45555 8 22873589 to 22876190 2601 + unclassified gene predicted gene 45555
Tssr76593 8 22922282 to 22922285 3 + TSS region transcription start site region 76593
Tssr76594 8 22938099 to 22938113 14 + TSS region transcription start site region 76594
Tssr76595 8 22938187 to 22938215 28 + TSS region transcription start site region 76595
Tssr76596 8 22938224 to 22938237 13 + TSS region transcription start site region 76596
Tssr76597 8 22939342 to 22939357 15 + TSS region transcription start site region 76597
Gm10043 8 22958207 to 22958441 234 - pseudogene predicted pseudogene 10043
Cpgi20160 8 22973954 to 22975854 1900 CpG island CpG island 20160
Ank1 8 22974844 to 23150497 175653 + protein coding gene ankyrin 1, erythroid
Tssr76598 8 22974846 to 22974882 36 + TSS region transcription start site region 76598
Tssr76599 8 22974886 to 22974903 17 + TSS region transcription start site region 76599
Tssr76600 8 22974923 to 22974932 9 + TSS region transcription start site region 76600
Tssr76601 8 23021969 to 23021972 3 + TSS region transcription start site region 76601
Tssr80614 8 23028720 to 23028741 21 - TSS region transcription start site region 80614
Gm30182 8 23032881 to 23034691 1810 - lncRNA gene predicted gene, 30182
Cpgi20161 8 23033856 to 23034147 291 CpG island CpG island 20161
Tssr76602 8 23035101 to 23035106 5 + TSS region transcription start site region 76602
Tssr76603 8 23035116 to 23035185 69 + TSS region transcription start site region 76603
Tssr80615 8 23035442 to 23035488 46 - TSS region transcription start site region 80615
Tssr76604 8 23039565 to 23039567 2 + TSS region transcription start site region 76604
Cpgi20162 8 23058120 to 23059113 993 CpG island CpG island 20162
Tssr2515 8 23058581 to 23058597 16 + TSS region transcription start site region 2515
Tssr76605 8 23062451 to 23062453 2 + TSS region transcription start site region 76605
Tssr2516 8 23080242 to 23080251 9 + TSS region transcription start site region 2516
Tssr76606 8 23085468 to 23085473 5 + TSS region transcription start site region 76606
Tssr76607 8 23085575 to 23085591 16 + TSS region transcription start site region 76607
Tssr76608 8 23095479 to 23095500 21 + TSS region transcription start site region 76608
Tssr80616 8 23095501 to 23095519 18 - TSS region transcription start site region 80616
Tssr76609 8 23095511 to 23095540 29 + TSS region transcription start site region 76609
Tssr80617 8 23095547 to 23095563 16 - TSS region transcription start site region 80617
Tssr76610 8 23095626 to 23095638 12 + TSS region transcription start site region 76610
Tssr80618 8 23095652 to 23095681 29 - TSS region transcription start site region 80618
Gm44365 8 23101972 to 23102096 124 - miRNA gene predicted gene, 44365