Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 8:22610988-22801780

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28 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Gm30086 8 22594063 to 22611124 17061 + lncRNA gene predicted gene, 30086
Gm30135 8 22614848 to 22619586 4738 + lncRNA gene predicted gene, 30135
Tssr76588 8 22624019 to 22624023 4 + TSS region transcription start site region 76588
Dkk4 8 22624043 to 22627547 3504 + protein coding gene dickkopf WNT signaling pathway inhibitor 4
Tssr2514 8 22625520 to 22625523 3 + TSS region transcription start site region 2514
Polb 8 22628126 to 22653435 25309 - protein coding gene polymerase (DNA directed), beta
Tssr80601 8 22633195 to 22633258 63 - TSS region transcription start site region 80601
Tssr80602 8 22633267 to 22633285 18 - TSS region transcription start site region 80602
Tssr80603 8 22633377 to 22633408 31 - TSS region transcription start site region 80603
A930013F10Rik 8 22634371 to 22636809 2438 - lncRNA gene RIKEN cDNA A930013F10 gene
Gm26909 8 22644861 to 22646286 1425 + lincRNA gene predicted gene, 26909
D8Mit16 8 22652234 to 22652541 307 DNA segment DNA segment, Chr 8, Massachusetts Institute of Technology 16
Cpgi20154 8 22653011 to 22653850 839 CpG island CpG island 20154
Tssr80604 8 22653394 to 22653405 11 - TSS region transcription start site region 80604
Tssr80605 8 22653406 to 22653458 52 - TSS region transcription start site region 80605
Ikbkb 8 22659212 to 22706589 47377 - protein coding gene inhibitor of kappaB kinase beta
Tssr80606 8 22671655 to 22671679 24 - TSS region transcription start site region 80606
Gm15346 8 22686265 to 22695646 9381 + antisense lncRNA gene predicted gene 15346
Tssr80607 8 22694061 to 22694081 20 - TSS region transcription start site region 80607
Tssr80608 8 22701530 to 22701579 49 - TSS region transcription start site region 80608
Cpgi20155 8 22705988 to 22706780 792 CpG island CpG island 20155
Tssr80609 8 22706507 to 22706580 73 - TSS region transcription start site region 80609
Tssr76589 8 22706626 to 22706632 6 + TSS region transcription start site region 76589
Tssr76590 8 22757726 to 22757729 3 + TSS region transcription start site region 76590
Plat 8 22757727 to 22782844 25117 + protein coding gene plasminogen activator, tissue
Tssr76591 8 22757745 to 22757761 16 + TSS region transcription start site region 76591
Tssr80610 8 22783444 to 22783447 3 - TSS region transcription start site region 80610
Ap3m2 8 22787354 to 22805622 18268 - protein coding gene adaptor-related protein complex 3, mu 2 subunit