MPD: Genes and genomic regions

Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g. 17:44-45 ..or.. X:22500000-23000000

Click here to work with the entire chromosomal region 8:21970721-22161627

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17 genes found.

Gene symbol	Chromo- some	Coordinates (bp, mm10)	Size (bp)	Strand	Feature Type	Gene name
Ccdc70	8	21969775 to 21974041	4266	+	protein coding gene	coiled-coil domain containing 70
D8Dcr4	8	21981229 to 21981326	97		DNA segment	DNA Segment, Chr 8, Derry C. Roopenian 4
Atp7b	8	21992783 to 22060074	67291	-	protein coding gene	ATPase, Cu++ transporting, beta polypeptide
Tssr80573	8	21993405 to 21993410	5	-	TSS region	transcription start site region 80573
Tssr80574	8	22006583 to 22006584	1	-	TSS region	transcription start site region 80574
Tssr80575	8	22039582 to 22039585	3	-	TSS region	transcription start site region 80575
Tssr80576	8	22039607 to 22039625	18	-	TSS region	transcription start site region 80576
Tssr80577	8	22039628 to 22039649	21	-	TSS region	transcription start site region 80577
Cpgi20142	8	22059845 to 22060989	1144		CpG island	CpG island 20142
Tssr80578	8	22060019 to 22060056	37	-	TSS region	transcription start site region 80578
Tssr80579	8	22060310 to 22060336	26	-	TSS region	transcription start site region 80579
Tssr76566	8	22060712 to 22060732	20	+	TSS region	transcription start site region 76566
Alg11	8	22060721 to 22071627	10906	+	protein coding gene	asparagine-linked glycosylation 11 (alpha-1,2-mannosyltransferase)
Nek5	8	22073616 to 22125053	51437	-	protein coding gene	NIMA (never in mitosis gene a)-related expressed kinase 5
Cpgi20143	8	22124789 to 22125163	374		CpG island	CpG island 20143
Tssr80580	8	22125030 to 22125073	43	-	TSS region	transcription start site region 80580
Nek3	8	22128283 to 22166435	38152	-	protein coding gene	NIMA (never in mitosis gene a)-related expressed kinase 3