Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 8:21340386-21791349

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43 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Defa-ps16 8 21342586 to 21342756 170 + pseudogene defensin, alpha, pseudogene 16
Defa2 8 21378517 to 21379495 978 + protein coding gene defensin, alpha, 2
Defa33 8 21391811 to 21392791 980 + protein coding gene defensin, alpha, 33
Defa36 8 21427428 to 21428386 958 + protein coding gene defensin, alpha, 36
Gm15305 8 21438675 to 21439467 792 + pseudogene predicted gene 15305
Defa-ps18 8 21445069 to 21445910 841 + pseudogene defensin, alpha, pseudogene 18
Gm15309 8 21454424 to 21454663 239 + pseudogene predicted gene 15309
Gm7849 8 21455427 to 21456517 1090 - protein coding gene predicted gene 7849
Gm23568 8 21456090 to 21456181 91 - snoRNA gene predicted gene, 23568
Gm15304 8 21460958 to 21463597 2639 + pseudogene predicted gene 15304
Tssr76553 8 21473204 to 21473208 4 + TSS region transcription start site region 76553
Defa-ps17 8 21473251 to 21473421 170 + pseudogene defensin, alpha, pseudogene 17
Defa20 8 21509258 to 21510237 979 + protein coding gene defensin, alpha, 20
Tssr76554 8 21529031 to 21529032 1 + TSS region transcription start site region 76554
Defa32 8 21529032 to 21530012 980 + protein coding gene defensin, alpha, 32
Gm24423 8 21548060 to 21548165 105 - snRNA gene predicted gene, 24423
Tssr76555 8 21565368 to 21565373 5 + TSS region transcription start site region 76555
Defa37 8 21565386 to 21566349 963 + protein coding gene defensin, alpha, 37
Gm15311 8 21576640 to 21577426 786 + pseudogene predicted gene 15311
Defa28 8 21582960 to 21583867 907 + protein coding gene defensin, alpha, 28
Gm15312 8 21592341 to 21592610 269 + pseudogene predicted gene 15312
Gm7861 8 21593487 to 21594465 978 - protein coding gene predicted gene 7861
Gm24829 8 21594038 to 21594129 91 - snoRNA gene predicted gene, 24829
Gm15314 8 21598905 to 21600791 1886 + pseudogene predicted gene 15314
Defa26 8 21618183 to 21618972 789 + protein coding gene defensin, alpha, 26
Gm15313 8 21639071 to 21640378 1307 + pseudogene predicted gene 15313
Defa17 8 21655780 to 21656735 955 + protein coding gene defensin, alpha, 17
Defa34 8 21665797 to 21666732 935 + protein coding gene defensin, alpha, 34
Defa-ps9 8 21688648 to 21689428 780 + pseudogene defensin, alpha, pseudogene 9
Defa-ps1 8 21695012 to 21695853 841 + pseudogene defensin, alpha, pseudogene 1
AY761184 8 21702524 to 21703647 1123 - protein coding gene cDNA sequence AY761184
Tssr80566 8 21702709 to 21702729 20 - TSS region transcription start site region 80566
Gm22447 8 21703175 to 21703266 91 - snoRNA gene predicted gene, 22447
Tssr80567 8 21703642 to 21703649 7 - TSS region transcription start site region 80567
Gm7869 8 21708029 to 21709350 1321 + pseudogene predicted gene 7869
Tssr76556 8 21722024 to 21722025 1 + TSS region transcription start site region 76556
Defa-ps10 8 21722070 to 21722240 170 + pseudogene defensin, alpha, pseudogene 10
Tssr76557 8 21734490 to 21734496 6 + TSS region transcription start site region 76557
Defa24 8 21734494 to 21735471 977 + protein coding gene defensin, alpha, 24
Defa-ps11 8 21749175 to 21750000 825 + pseudogene defensin, alpha, pseudogene 11
Tssr80568 8 21756839 to 21756863 24 - TSS region transcription start site region 80568
Tssr76558 8 21776567 to 21776595 28 + TSS region transcription start site region 76558
Defb1 8 21776599 to 21795185 18586 + protein coding gene defensin beta 1