Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 8:20880047-21231016

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34 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Gm21944 8 20876499 to 20889113 12614 + pseudogene predicted gene, 21944
Gm20796 8 20882363 to 20888200 5837 - pseudogene predicted gene, 20796
Tssr2511 8 20892665 to 20892668 3 + TSS region transcription start site region 2511
Defb33 8 20892669 to 20897723 5054 + protein coding gene defensin beta 33
Gm15056 8 20900606 to 20901984 1378 - protein coding gene predicted gene 15056
Tssr80557 8 20902452 to 20902459 7 - TSS region transcription start site region 80557
Tssr80558 8 20902466 to 20902477 11 - TSS region transcription start site region 80558
Tssr80559 8 20902494 to 20902501 7 - TSS region transcription start site region 80559
Gm6040 8 20916490 to 20922071 5581 - protein coding gene predicted gene 6040
Tssr80560 8 20922042 to 20922049 7 - TSS region transcription start site region 80560
Tssr80561 8 20922059 to 20922086 27 - TSS region transcription start site region 80561
Tssr80562 8 20922092 to 20922098 6 - TSS region transcription start site region 80562
AY761185 8 20943694 to 20944710 1016 - protein coding gene cDNA sequence AY761185
Tssr80563 8 20944752 to 20944756 4 - TSS region transcription start site region 80563
Defa21 8 21025545 to 21026516 971 + protein coding gene defensin, alpha, 21
Gm23142 8 21040256 to 21040360 104 - snRNA gene predicted gene, 23142
Defa23 8 21055047 to 21056016 969 + protein coding gene defensin, alpha, 23
Defa35 8 21065038 to 21065996 958 + protein coding gene defensin, alpha, 35
Defa-ps3 8 21078141 to 21078846 705 + pseudogene defensin, alpha, pseudogene 3
Tssr76550 8 21084395 to 21084400 5 + TSS region transcription start site region 76550
Defa25 8 21084442 to 21085285 843 + protein coding gene defensin, alpha, 25
Gm6689 8 21091366 to 21091846 480 + pseudogene predicted gene 6689
Gm14851 8 21095074 to 21096050 976 - protein coding gene predicted gene 14851
Gm24568 8 21095624 to 21095715 91 - snoRNA gene predicted gene, 24568
Gm2869 8 21100651 to 21103271 2620 + pseudogene predicted gene 2869
Defa-ps4 8 21119166 to 21119348 182 + pseudogene defensin, alpha, pseudogene 4
Tssr76551 8 21134610 to 21134627 17 + TSS region transcription start site region 76551
Defa30 8 21134650 to 21135598 948 + protein coding gene defensin, alpha, 30
Defa22 8 21162277 to 21163249 972 + protein coding gene defensin, alpha, 22
Gm26240 8 21176768 to 21176872 104 - snRNA gene predicted gene, 26240
Defa31 8 21191614 to 21192549 935 + protein coding gene defensin, alpha, 31
Gm15293 8 21201604 to 21202446 842 + protein coding gene predicted gene 15293
Defa-ps5 8 21218984 to 21219763 779 + pseudogene defensin, alpha, pseudogene 5
Defa-ps6 8 21225406 to 21225577 171 + pseudogene defensin, alpha, pseudogene 6