MPD: Genes and genomic regions

Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g. 17:44-45 ..or.. X:22500000-23000000

Click here to work with the entire chromosomal region 8:18882729-19000975

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18 genes found.

Gene symbol	Chromo- some	Coordinates (bp, mm10)	Size (bp)	Strand	Feature Type	Gene name
Agpat5	8	18846279 to 18884413	38134	+	protein coding gene	1-acylglycerol-3-phosphate O-acyltransferase 5 (lysophosphatidic acid acyltransferase, epsilon)
Gm35934	8	18890192 to 18902291	12099	-	antisense lncRNA gene	predicted gene, 35934
Tssr76529	8	18899612 to 18899617	5	+	TSS region	transcription start site region 76529
Tssr80535	8	18902268 to 18902277	9	-	TSS region	transcription start site region 80535
Gm45770	8	18905439 to 18906533	1094	-	pseudogene	predicted gene 45770
Xkr5	8	18932729 to 18950975	18246	-	protein coding gene	X-linked Kx blood group related 5
Gm22551	8	18932989 to 18933091	102	+	snoRNA gene	predicted gene, 22551
Gm40464	8	18950289 to 18970684	20395	+	lncRNA gene	predicted gene, 40464
Cpgi20137	8	18950324 to 18951026	702		CpG island	CpG island 20137
Tssr80536	8	18950932 to 18950965	33	-	TSS region	transcription start site region 80536
Defb40	8	18974940 to 18978116	3176	-	protein coding gene	defensin beta 40
Tssr80537	8	18978191 to 18978201	10	-	TSS region	transcription start site region 80537
Tssr80538	8	18978211 to 18978227	16	-	TSS region	transcription start site region 80538
Defb37	8	18986233 to 18991055	4822	-	protein coding gene	defensin beta 37
Gm39138	8	18989004 to 18998649	9645	+	lncRNA gene	predicted gene, 39138
Tssr80539	8	18990992 to 18991001	9	-	TSS region	transcription start site region 80539
Tssr80540	8	18991028 to 18991041	13	-	TSS region	transcription start site region 80540
Tssr80541	8	18991046 to 18991061	15	-	TSS region	transcription start site region 80541