Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 8:18726468-18966489

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30 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Mcph1 8 18595131 to 18803189 208058 + protein coding gene microcephaly, primary autosomal recessive 1
Angpt2 8 18690263 to 18741562 51299 - protein coding gene angiopoietin 2
Tssr80527 8 18741342 to 18741359 17 - TSS region transcription start site region 80527
Tssr80528 8 18741365 to 18741378 13 - TSS region transcription start site region 80528
Tssr80529 8 18741487 to 18741500 13 - TSS region transcription start site region 80529
Tssr80530 8 18741503 to 18741525 22 - TSS region transcription start site region 80530
Tssr80531 8 18741542 to 18741566 24 - TSS region transcription start site region 80531
Tssr80532 8 18741570 to 18741587 17 - TSS region transcription start site region 80532
Tssr80533 8 18768194 to 18768209 15 - TSS region transcription start site region 80533
D8Mit62 8 18771225 to 18771344 119 DNA segment DNA segment, Chr 8, Massachusetts Institute of Technology 62
9630029G12Rik 8 18844180 to 18846775 2595 unclassified non-coding RNA gene RIKEN cDNA 9630029G12 gene
Cpgi20136 8 18845790 to 18847159 1369 CpG island CpG island 20136
Tssr80534 8 18846147 to 18846190 43 - TSS region transcription start site region 80534
Tssr76523 8 18846251 to 18846328 77 + TSS region transcription start site region 76523
Agpat5 8 18846279 to 18884413 38134 + protein coding gene 1-acylglycerol-3-phosphate O-acyltransferase 5 (lysophosphatidic acid acyltransferase, epsilon)
Tssr76524 8 18846468 to 18846489 21 + TSS region transcription start site region 76524
Tssr76525 8 18846491 to 18846512 21 + TSS region transcription start site region 76525
Tssr76526 8 18846524 to 18846544 20 + TSS region transcription start site region 76526
Tssr76527 8 18846580 to 18846593 13 + TSS region transcription start site region 76527
Gm45493 8 18862196 to 18866143 3947 + unclassified gene predicted gene 45493
Tssr76528 8 18882226 to 18882245 19 + TSS region transcription start site region 76528
Gm35934 8 18890192 to 18902291 12099 - antisense lncRNA gene predicted gene, 35934
Tssr76529 8 18899612 to 18899617 5 + TSS region transcription start site region 76529
Tssr80535 8 18902268 to 18902277 9 - TSS region transcription start site region 80535
Gm45770 8 18905439 to 18906533 1094 - pseudogene predicted gene 45770
Xkr5 8 18932729 to 18950975 18246 - protein coding gene X-linked Kx blood group related 5
Gm22551 8 18932989 to 18933091 102 + snoRNA gene predicted gene, 22551
Gm40464 8 18950289 to 18970684 20395 + lncRNA gene predicted gene, 40464
Cpgi20137 8 18950324 to 18951026 702 CpG island CpG island 20137
Tssr80536 8 18950932 to 18950965 33 - TSS region transcription start site region 80536