Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 8:17447917-18658666

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41 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Csmd1 8 15892538 to 17535385 1642847 - protein coding gene CUB and Sushi multiple domains 1
Lfibq22 8 17328897 to 18316447 987550 QTL liver fibrosis QTL 22
D8Mit355.1 8 17451569 to 17451678 109 DNA segment DNA segment, Chr 8, Massachusetts Institute of Technology 355.1
Tssr80516 8 17459525 to 17459540 15 - TSS region transcription start site region 80516
Tssr80517 8 17466838 to 17466842 4 - TSS region transcription start site region 80517
D8Mit221 8 17517698 to 17517805 107 DNA segment DNA segment, Chr 8, Massachusetts Institute of Technology 221
Cpgi20133 8 17532429 to 17532924 495 CpG island CpG island 20133
Cpgi20134 8 17534403 to 17535834 1431 CpG island CpG island 20134
Tssr80518 8 17535190 to 17535197 7 - TSS region transcription start site region 80518
Tssr80519 8 17535205 to 17535219 14 - TSS region transcription start site region 80519
Tssr80520 8 17535229 to 17535240 11 - TSS region transcription start site region 80520
Tssr80521 8 17535251 to 17535390 139 - TSS region transcription start site region 80521
Tssr80522 8 17535608 to 17535632 24 - TSS region transcription start site region 80522
Tssr80523 8 17535634 to 17535645 11 - TSS region transcription start site region 80523
Tssr80524 8 17535661 to 17535677 16 - TSS region transcription start site region 80524
Gm39137 8 17562287 to 17574415 12128 + lncRNA gene predicted gene, 39137
D8Mit203 8 17586150 to 17586294 144 DNA segment DNA segment, Chr 8, Massachusetts Institute of Technology 203
Tssr76517 8 17590516 to 17590544 28 + TSS region transcription start site region 76517
D8Mit172 8 17804003 to 17804256 253 DNA segment DNA segment, Chr 8, Massachusetts Institute of Technology 172
Gm7724 8 18052917 to 18053666 749 - pseudogene predicted gene 7724
D8Mit22 8 18093267 to 18093416 149 DNA segment DNA segment, Chr 8, Massachusetts Institute of Technology 22
Gm25665 8 18274712 to 18274821 109 - snoRNA gene predicted gene, 25665
Tssr80525 8 18296488 to 18296489 1 - TSS region transcription start site region 80525
1700014L14Rik 8 18319523 to 18334338 14815 - lincRNA gene RIKEN cDNA 1700014L14 gene
Tssr80526 8 18334318 to 18334321 3 - TSS region transcription start site region 80526
D8Mit21 8 18369135 to 18369344 209 DNA segment DNA segment, Chr 8, Massachusetts Institute of Technology 21
D8Mit355 8 18446500 to 18446747 247 DNA segment DNA segment, Chr 8, Massachusetts Institute of Technology 355
Gm40463 8 18497497 to 18522065 24568 - lncRNA gene predicted gene, 40463
Tssr76518 8 18500723 to 18500726 3 + TSS region transcription start site region 76518
Gm24469 8 18512515 to 18512645 130 - snoRNA gene predicted gene, 24469
Gm35740 8 18541975 to 18545256 3281 - lncRNA gene predicted gene, 35740
D8Dcr3 8 18580047 to 18580146 99 DNA segment DNA Segment, Chr 8, Derry C. Roopenian 3
Cpgi20135 8 18594845 to 18595915 1070 CpG island CpG island 20135
Tssr76519 8 18595128 to 18595141 13 + TSS region transcription start site region 76519
Mcph1 8 18595131 to 18803189 208058 + protein coding gene microcephaly, primary autosomal recessive 1
Tssr76520 8 18595144 to 18595186 42 + TSS region transcription start site region 76520
Tssr76521 8 18595526 to 18595583 57 + TSS region transcription start site region 76521
Tssr76522 8 18606895 to 18606902 7 + TSS region transcription start site region 76522
Gm25763 8 18613981 to 18614109 128 - snoRNA gene predicted gene, 25763
Gm16725 8 18652801 to 18678056 25255 - antisense lncRNA gene predicted gene, 16725
Gm17149 8 18656615 to 18656989 374 - pseudogene predicted gene 17149