Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 8:17165516-18015544

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35 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Csmd1 8 15892538 to 17535385 1642847 - protein coding gene CUB and Sushi multiple domains 1
Tssr80503 8 17186907 to 17186917 10 - TSS region transcription start site region 80503
Tssr80504 8 17212973 to 17212975 2 - TSS region transcription start site region 80504
Tssr80505 8 17214841 to 17214860 19 - TSS region transcription start site region 80505
D8Mit219 8 17241306 to 17241508 202 DNA segment DNA segment, Chr 8, Massachusetts Institute of Technology 219
Tssr80506 8 17270601 to 17270603 2 - TSS region transcription start site region 80506
Gm39136 8 17286531 to 17293135 6604 + lncRNA gene predicted gene, 39136
Tssr80507 8 17290125 to 17290140 15 - TSS region transcription start site region 80507
Lfibq22 8 17328897 to 18316447 987550 QTL liver fibrosis QTL 22
Tssr80508 8 17333309 to 17333321 12 - TSS region transcription start site region 80508
Tssr80509 8 17343624 to 17343627 3 - TSS region transcription start site region 80509
Tssr80510 8 17354891 to 17354900 9 - TSS region transcription start site region 80510
Tssr80511 8 17372133 to 17372143 10 - TSS region transcription start site region 80511
Tssr80512 8 17380927 to 17380938 11 - TSS region transcription start site region 80512
Tssr80513 8 17380955 to 17380968 13 - TSS region transcription start site region 80513
Tssr80514 8 17419715 to 17419720 5 - TSS region transcription start site region 80514
C030002A05Rik 8 17438810 to 17439237 427 unclassified gene RIKEN cDNA C030002A05 gene
Tssr80515 8 17438965 to 17438969 4 - TSS region transcription start site region 80515
D8Mit355.1 8 17451569 to 17451678 109 DNA segment DNA segment, Chr 8, Massachusetts Institute of Technology 355.1
Tssr80516 8 17459525 to 17459540 15 - TSS region transcription start site region 80516
Tssr80517 8 17466838 to 17466842 4 - TSS region transcription start site region 80517
D8Mit221 8 17517698 to 17517805 107 DNA segment DNA segment, Chr 8, Massachusetts Institute of Technology 221
Cpgi20133 8 17532429 to 17532924 495 CpG island CpG island 20133
Cpgi20134 8 17534403 to 17535834 1431 CpG island CpG island 20134
Tssr80518 8 17535190 to 17535197 7 - TSS region transcription start site region 80518
Tssr80519 8 17535205 to 17535219 14 - TSS region transcription start site region 80519
Tssr80520 8 17535229 to 17535240 11 - TSS region transcription start site region 80520
Tssr80521 8 17535251 to 17535390 139 - TSS region transcription start site region 80521
Tssr80522 8 17535608 to 17535632 24 - TSS region transcription start site region 80522
Tssr80523 8 17535634 to 17535645 11 - TSS region transcription start site region 80523
Tssr80524 8 17535661 to 17535677 16 - TSS region transcription start site region 80524
Gm39137 8 17562287 to 17574415 12128 + lncRNA gene predicted gene, 39137
D8Mit203 8 17586150 to 17586294 144 DNA segment DNA segment, Chr 8, Massachusetts Institute of Technology 203
Tssr76517 8 17590516 to 17590544 28 + TSS region transcription start site region 76517
D8Mit172 8 17804003 to 17804256 253 DNA segment DNA segment, Chr 8, Massachusetts Institute of Technology 172