Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 8:15822242-17274872

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30 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Gm7128 8 15877664 to 15878196 532 + pseudogene predicted gene 7128
Csmd1 8 15892538 to 17535385 1642847 - protein coding gene CUB and Sushi multiple domains 1
Gm46073 8 15933416 to 15934667 1251 + lncRNA gene predicted gene, 46073
Mir3106 8 16168757 to 16168838 81 - miRNA gene microRNA 3106
Gm16346 8 16226003 to 16232305 6302 + antisense lncRNA gene predicted gene 16346
D8Dcr2 8 16246728 to 16246825 97 DNA segment DNA Segment, Chr 8, Derry C. Roopenian 2
Tssr80493 8 16297094 to 16297095 1 - TSS region transcription start site region 80493
Tssr80494 8 16421871 to 16421874 3 - TSS region transcription start site region 80494
Tssr76516 8 16433161 to 16433180 19 + TSS region transcription start site region 76516
Gm16347 8 16433175 to 16437040 3865 + antisense lncRNA gene predicted gene 16347
Gm45393 8 16547242 to 16549872 2630 + unclassified gene predicted gene 45393
Gm18319 8 16581824 to 16582722 898 + pseudogene predicted gene, 18319
Tssr80495 8 16670158 to 16670170 12 - TSS region transcription start site region 80495
Tssr80496 8 16670229 to 16670236 7 - TSS region transcription start site region 80496
Gm45394 8 16751319 to 16752493 1174 + unclassified gene predicted gene 45394
Tssr80497 8 16815686 to 16815689 3 - TSS region transcription start site region 80497
Gm25278 8 16852168 to 16852287 119 + snoRNA gene predicted gene, 25278
3110080E11Rik 8 16912706 to 16916182 3476 - unclassified gene RIKEN cDNA 3110080E11 gene
C030026K05Rik 8 16959940 to 16964158 4218 unclassified gene RIKEN cDNA C030026K05 gene
Tssr80498 8 16992979 to 16992983 4 - TSS region transcription start site region 80498
Poats1 8 17032610 to 28359439 11326829 QTL post-ovarectomy adrenal tumor susceptibility 1
Tssr80499 8 17065438 to 17065464 26 - TSS region transcription start site region 80499
Tssr80500 8 17091098 to 17091099 1 - TSS region transcription start site region 80500
Tssr80501 8 17106661 to 17106664 3 - TSS region transcription start site region 80501
Tssr80502 8 17115063 to 17115065 2 - TSS region transcription start site region 80502
Tssr80503 8 17186907 to 17186917 10 - TSS region transcription start site region 80503
Tssr80504 8 17212973 to 17212975 2 - TSS region transcription start site region 80504
Tssr80505 8 17214841 to 17214860 19 - TSS region transcription start site region 80505
D8Mit219 8 17241306 to 17241508 202 DNA segment DNA segment, Chr 8, Massachusetts Institute of Technology 219
Tssr80506 8 17270601 to 17270603 2 - TSS region transcription start site region 80506