Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 8:14899440-15639690

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100 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Cln8 8 14881335 to 14901720 20385 + protein coding gene ceroid-lipofuscinosis, neuronal 8
Tssr76466 8 14906399 to 14906414 15 + TSS region transcription start site region 76466
4930513N24Rik 8 14910589 to 14911491 902 unclassified gene RIKEN cDNA 4930513N24 gene
Cpgi20127 8 14911070 to 14912393 1323 CpG island CpG island 20127
Arhgef10 8 14911663 to 15001085 89422 + protein coding gene Rho guanine nucleotide exchange factor (GEF) 10
Tssr76467 8 14911668 to 14911677 9 + TSS region transcription start site region 76467
Tssr76468 8 14911704 to 14911742 38 + TSS region transcription start site region 76468
Gm35285 8 14947271 to 14953177 5906 - lncRNA gene predicted gene, 35285
Gm16350 8 14961066 to 14961586 520 - antisense lncRNA gene predicted gene 16350
Tssr80480 8 14961573 to 14961590 17 - TSS region transcription start site region 80480
Tssr76469 8 14961813 to 14961822 9 + TSS region transcription start site region 76469
Tssr76470 8 14961880 to 14961899 19 + TSS region transcription start site region 76470
Tssr76471 8 14961901 to 14961913 12 + TSS region transcription start site region 76471
Tssr76472 8 14974966 to 14974976 10 + TSS region transcription start site region 76472
Tssr80481 8 14989671 to 14989675 4 - TSS region transcription start site region 80481
Tssr76473 8 14992992 to 14993010 18 + TSS region transcription start site region 76473
Gm35149 8 14994134 to 14996912 2778 - lncRNA gene predicted gene, 35149
Tssr80482 8 14994485 to 14994500 15 - TSS region transcription start site region 80482
Tssr76474 8 14994647 to 14994658 11 + TSS region transcription start site region 76474
Tssr80483 8 14995994 to 14996011 17 - TSS region transcription start site region 80483
Tssr76475 8 14996128 to 14996144 16 + TSS region transcription start site region 76475
Tssr76476 8 14996156 to 14996157 1 + TSS region transcription start site region 76476
Tssr76477 8 14997000 to 14997016 16 + TSS region transcription start site region 76477
Tssr80484 8 14998614 to 14998618 4 - TSS region transcription start site region 80484
Cpgi20128 8 15010780 to 15012205 1425 CpG island CpG island 20128
Kbtbd11 8 15011025 to 15033333 22308 + protein coding gene kelch repeat and BTB (POZ) domain containing 11
Tssr76478 8 15011065 to 15011083 18 + TSS region transcription start site region 76478
Tssr2503 8 15011099 to 15011113 14 + TSS region transcription start site region 2503
Tssr76479 8 15011209 to 15011235 26 + TSS region transcription start site region 76479
Tssr76480 8 15011267 to 15011301 34 + TSS region transcription start site region 76480
Tssr76481 8 15011377 to 15011393 16 + TSS region transcription start site region 76481
Tssr76482 8 15011417 to 15011426 9 + TSS region transcription start site region 76482
Tssr76483 8 15011430 to 15011437 7 + TSS region transcription start site region 76483
Tssr76484 8 15011441 to 15011457 16 + TSS region transcription start site region 76484
Tssr80485 8 15011769 to 15011771 2 - TSS region transcription start site region 80485
5830468F06Rik 8 15015092 to 15018907 3815 - antisense lncRNA gene RIKEN cDNA 5830468F06 gene
Tssr76485 8 15018465 to 15018474 9 + TSS region transcription start site region 76485
Tssr80486 8 15018891 to 15018906 15 - TSS region transcription start site region 80486
Tssr80487 8 15018922 to 15018940 18 - TSS region transcription start site region 80487
Gm37844 8 15024326 to 15028422 4096 - unclassified gene predicted gene, 37844
Tssr76486 8 15027167 to 15027176 9 + TSS region transcription start site region 76486
Tssr76487 8 15027186 to 15027206 20 + TSS region transcription start site region 76487
Cpgi20129 8 15027248 to 15029372 2124 CpG island CpG island 20129
Tssr76488 8 15027299 to 15027349 50 + TSS region transcription start site region 76488
Tssr76489 8 15027382 to 15027387 5 + TSS region transcription start site region 76489
Tssr80488 8 15027620 to 15027663 43 - TSS region transcription start site region 80488
Tssr76490 8 15027759 to 15027777 18 + TSS region transcription start site region 76490
Tssr76491 8 15027958 to 15027983 25 + TSS region transcription start site region 76491
Tssr76492 8 15028754 to 15028769 15 + TSS region transcription start site region 76492
Tssr2504 8 15031608 to 15031615 7 + TSS region transcription start site region 2504
Tssr76493 8 15032409 to 15032435 26 + TSS region transcription start site region 76493
Tssr76494 8 15034159 to 15034166 7 + TSS region transcription start site region 76494
Tssr76495 8 15036764 to 15036773 9 + TSS region transcription start site region 76495
Tssr76496 8 15036820 to 15036831 11 + TSS region transcription start site region 76496
Gm35340 8 15038550 to 15040422 1872 + lncRNA gene predicted gene, 35340
BB014433 8 15041446 to 15046078 4632 - protein coding gene expressed sequence BB014433
Gm45276 8 15044563 to 15045648 1085 + unclassified gene predicted gene 45276
Tssr80489 8 15046047 to 15046091 44 - TSS region transcription start site region 80489
Gm45274 8 15046212 to 15050770 4558 + lincRNA gene predicted gene 45274
Tssr80490 8 15046836 to 15046841 5 - TSS region transcription start site region 80490
Tssr76497 8 15057149 to 15057160 11 + TSS region transcription start site region 76497
D8Dcr1 8 15057191 to 15057292 101 DNA segment DNA Segment, Chr 8, Derry C. Roopenian 1
Tssr76498 8 15057334 to 15057344 10 + TSS region transcription start site region 76498
Tssr76499 8 15057646 to 15057660 14 + TSS region transcription start site region 76499
Myom2 8 15057653 to 15133420 75767 + protein coding gene myomesin 2
Tssr76500 8 15057667 to 15057691 24 + TSS region transcription start site region 76500
Tssr76501 8 15058970 to 15058974 4 + TSS region transcription start site region 76501
Tssr76502 8 15058999 to 15059010 11 + TSS region transcription start site region 76502
Tssr76503 8 15059058 to 15059081 23 + TSS region transcription start site region 76503
Tssr76504 8 15059083 to 15059090 7 + TSS region transcription start site region 76504
Tssr76505 8 15060152 to 15060218 66 + TSS region transcription start site region 76505
Tssr76506 8 15060282 to 15060301 19 + TSS region transcription start site region 76506
Tssr76507 8 15060314 to 15060346 32 + TSS region transcription start site region 76507
Tssr76508 8 15064820 to 15064830 10 + TSS region transcription start site region 76508
Tssr76509 8 15077718 to 15077725 7 + TSS region transcription start site region 76509
Tssr76510 8 15086117 to 15086125 8 + TSS region transcription start site region 76510
Tssr76511 8 15086239 to 15086246 7 + TSS region transcription start site region 76511
Gm15678 8 15100329 to 15101350 1021 - pseudogene predicted gene 15678
Gm7706 8 15141044 to 15371982 230938 + lincRNA gene predicted gene 7706
Gm45271 8 15182089 to 15189612 7523 - lincRNA gene predicted gene 45271
Gm24231 8 15227405 to 15227537 132 - snoRNA gene predicted gene, 24231
Cpgi20130 8 15269440 to 15269690 250 CpG island CpG island 20130
Tssr76512 8 15326791 to 15326793 2 + TSS region transcription start site region 76512
Tssr80491 8 15327264 to 15327305 41 - TSS region transcription start site region 80491
Gm35392 8 15375641 to 15382429 6788 + lincRNA gene predicted gene, 35392
Cpgi20131 8 15389186 to 15389505 319 CpG island CpG island 20131
Gm24222 8 15412324 to 15412416 92 + rRNA gene predicted gene, 24222
Gm25871 8 15413980 to 15414089 109 + miRNA gene predicted gene, 25871
Gm25255 8 15418536 to 15418645 109 + miRNA gene predicted gene, 25255
Gm45678 8 15437866 to 15438160 294 + pseudogene predicted gene 45678
Tssr76513 8 15519902 to 15519925 23 + TSS region transcription start site region 76513
Tssr80492 8 15519933 to 15519937 4 - TSS region transcription start site region 80492
Gm46033 8 15530401 to 15579574 49173 + lncRNA gene predicted gene, 46033
Gm45677 8 15537582 to 15538922 1340 + unclassified gene predicted gene 45677
Cpgi20132 8 15562485 to 15562647 162 CpG island CpG island 20132
Gm35453 8 15580279 to 15583962 3683 - lincRNA gene predicted gene, 35453
Gm45676 8 15581943 to 15584719 2776 + lincRNA gene predicted gene 45676
Gm45408 8 15584723 to 15670425 85702 + lincRNA gene predicted gene 45408
D8Mit61 8 15629039 to 15629221 182 DNA segment DNA segment, Chr 8, Massachusetts Institute of Technology 61
Gm45675 8 15629981 to 15633409 3428 + unclassified gene predicted gene 45675