Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 8:14896573-15026590

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42 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Cln8 8 14881335 to 14901720 20385 + protein coding gene ceroid-lipofuscinosis, neuronal 8
Tssr76464 8 14897198 to 14897228 30 + TSS region transcription start site region 76464
Tssr76465 8 14898080 to 14898105 25 + TSS region transcription start site region 76465
Tssr76466 8 14906399 to 14906414 15 + TSS region transcription start site region 76466
4930513N24Rik 8 14910589 to 14911491 902 unclassified gene RIKEN cDNA 4930513N24 gene
Cpgi20127 8 14911070 to 14912393 1323 CpG island CpG island 20127
Arhgef10 8 14911663 to 15001085 89422 + protein coding gene Rho guanine nucleotide exchange factor (GEF) 10
Tssr76467 8 14911668 to 14911677 9 + TSS region transcription start site region 76467
Tssr76468 8 14911704 to 14911742 38 + TSS region transcription start site region 76468
Gm35285 8 14947271 to 14953177 5906 - lncRNA gene predicted gene, 35285
Gm16350 8 14961066 to 14961586 520 - antisense lncRNA gene predicted gene 16350
Tssr80480 8 14961573 to 14961590 17 - TSS region transcription start site region 80480
Tssr76469 8 14961813 to 14961822 9 + TSS region transcription start site region 76469
Tssr76470 8 14961880 to 14961899 19 + TSS region transcription start site region 76470
Tssr76471 8 14961901 to 14961913 12 + TSS region transcription start site region 76471
Tssr76472 8 14974966 to 14974976 10 + TSS region transcription start site region 76472
Tssr80481 8 14989671 to 14989675 4 - TSS region transcription start site region 80481
Tssr76473 8 14992992 to 14993010 18 + TSS region transcription start site region 76473
Gm35149 8 14994134 to 14996912 2778 - lncRNA gene predicted gene, 35149
Tssr80482 8 14994485 to 14994500 15 - TSS region transcription start site region 80482
Tssr76474 8 14994647 to 14994658 11 + TSS region transcription start site region 76474
Tssr80483 8 14995994 to 14996011 17 - TSS region transcription start site region 80483
Tssr76475 8 14996128 to 14996144 16 + TSS region transcription start site region 76475
Tssr76476 8 14996156 to 14996157 1 + TSS region transcription start site region 76476
Tssr76477 8 14997000 to 14997016 16 + TSS region transcription start site region 76477
Tssr80484 8 14998614 to 14998618 4 - TSS region transcription start site region 80484
Cpgi20128 8 15010780 to 15012205 1425 CpG island CpG island 20128
Kbtbd11 8 15011025 to 15033333 22308 + protein coding gene kelch repeat and BTB (POZ) domain containing 11
Tssr76478 8 15011065 to 15011083 18 + TSS region transcription start site region 76478
Tssr2503 8 15011099 to 15011113 14 + TSS region transcription start site region 2503
Tssr76479 8 15011209 to 15011235 26 + TSS region transcription start site region 76479
Tssr76480 8 15011267 to 15011301 34 + TSS region transcription start site region 76480
Tssr76481 8 15011377 to 15011393 16 + TSS region transcription start site region 76481
Tssr76482 8 15011417 to 15011426 9 + TSS region transcription start site region 76482
Tssr76483 8 15011430 to 15011437 7 + TSS region transcription start site region 76483
Tssr76484 8 15011441 to 15011457 16 + TSS region transcription start site region 76484
Tssr80485 8 15011769 to 15011771 2 - TSS region transcription start site region 80485
5830468F06Rik 8 15015092 to 15018907 3815 - antisense lncRNA gene RIKEN cDNA 5830468F06 gene
Tssr76485 8 15018465 to 15018474 9 + TSS region transcription start site region 76485
Tssr80486 8 15018891 to 15018906 15 - TSS region transcription start site region 80486
Tssr80487 8 15018922 to 15018940 18 - TSS region transcription start site region 80487
Gm37844 8 15024326 to 15028422 4096 - unclassified gene predicted gene, 37844