Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000


Click here to work with the entire chromosomal region 8:13288751-13428448

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34 genes found.
Gene symbol Chromo-
some
Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Tmco3 8 13288190 to 13322924 34734 + protein coding gene transmembrane and coiled-coil domains 3
Tssr76392 8 13292689 to 13292727 38 + TSS region transcription start site region 76392
Tssr80438 8 13306660 to 13306661 1 - TSS region transcription start site region 80438
Cpgi20112 8 13337933 to 13339763 1830 CpG island CpG island 20112
Tssr76393 8 13338745 to 13338756 11 + TSS region transcription start site region 76393
Tfdp1 8 13338751 to 13378448 39697 + protein coding gene transcription factor Dp 1
Tssr76394 8 13338760 to 13338817 57 + TSS region transcription start site region 76394
Tssr76395 8 13339656 to 13339661 5 + TSS region transcription start site region 76395
Tssr80439 8 13351007 to 13351011 4 - TSS region transcription start site region 80439
Tssr76396 8 13351651 to 13351657 6 + TSS region transcription start site region 76396
Tssr76397 8 13351743 to 13351770 27 + TSS region transcription start site region 76397
Tssr76398 8 13354436 to 13354448 12 + TSS region transcription start site region 76398
Atp4b 8 13386209 to 13396778 10569 - protein coding gene ATPase, H+/K+ exchanging, beta polypeptide
Tssr76399 8 13386643 to 13386652 9 + TSS region transcription start site region 76399
Tssr80440 8 13387475 to 13387494 19 - TSS region transcription start site region 80440
Tssr80441 8 13388798 to 13388815 17 - TSS region transcription start site region 80441
Tssr80442 8 13389693 to 13389702 9 - TSS region transcription start site region 80442
Tssr80443 8 13389859 to 13389866 7 - TSS region transcription start site region 80443
Tssr80444 8 13390099 to 13390103 4 - TSS region transcription start site region 80444
Gm45410 8 13391106 to 13392198 1092 + unclassified gene predicted gene 45410
Tssr80445 8 13396769 to 13396783 14 - TSS region transcription start site region 80445
D8Mit17 8 13397210 to 13397432 222 DNA segment DNA segment, Chr 8, Massachusetts Institute of Technology 17
Mts5 8 13397210 to 13397432 222 QTL mammary tumor susceptibility 5
Sluc42 8 13397210 to 34854071 21456861 QTL susceptibility to lung cancer 42
Tssr76400 8 13404906 to 13404912 6 + TSS region transcription start site region 76400
Tssr76401 8 13404940 to 13404950 10 + TSS region transcription start site region 76401
Tssr76402 8 13405080 to 13405098 18 + TSS region transcription start site region 76402
Grk1 8 13405081 to 13421951 16870 + protein coding gene G protein-coupled receptor kinase 1
Tssr76403 8 13405116 to 13405122 6 + TSS region transcription start site region 76403
Tssr76404 8 13414266 to 13414279 13 + TSS region transcription start site region 76404
Tssr76405 8 13414289 to 13414295 6 + TSS region transcription start site region 76405
Tssr2498 8 13414299 to 13414308 9 + TSS region transcription start site region 2498
Tssr76406 8 13425469 to 13425503 34 + TSS region transcription start site region 76406
D8Mit254 8 13426432 to 13426548 116 DNA segment DNA segment, Chr 8, Massachusetts Institute of Technology 254