Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 8:13047887-13287916

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101 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
F10 8 13037308 to 13056676 19368 + protein coding gene coagulation factor X
Tssr76338 8 13052285 to 13052289 4 + TSS region transcription start site region 76338
Tssr76339 8 13055674 to 13055681 7 + TSS region transcription start site region 76339
Tssr76340 8 13055832 to 13055843 11 + TSS region transcription start site region 76340
Tssr2495 8 13055848 to 13055853 5 + TSS region transcription start site region 2495
Tssr76341 8 13055954 to 13055966 12 + TSS region transcription start site region 76341
Tssr76342 8 13055977 to 13055988 11 + TSS region transcription start site region 76342
Tssr76343 8 13056027 to 13056036 9 + TSS region transcription start site region 76343
Tssr76344 8 13056148 to 13056156 8 + TSS region transcription start site region 76344
Tssr76345 8 13056157 to 13056175 18 + TSS region transcription start site region 76345
Tssr76346 8 13060575 to 13060587 12 + TSS region transcription start site region 76346
Proz 8 13060581 to 13075006 14425 + protein coding gene protein Z, vitamin K-dependent plasma glycoprotein
Tssr76347 8 13060591 to 13060620 29 + TSS region transcription start site region 76347
Tssr76348 8 13060909 to 13060918 9 + TSS region transcription start site region 76348
Tssr76349 8 13060921 to 13060960 39 + TSS region transcription start site region 76349
Tssr76350 8 13060982 to 13061027 45 + TSS region transcription start site region 76350
Tssr76351 8 13068691 to 13068697 6 + TSS region transcription start site region 76351
Gm33691 8 13068774 to 13071080 2306 + protein coding gene predicted gene, 33691
Tssr76352 8 13073960 to 13073972 12 + TSS region transcription start site region 76352
Tssr76353 8 13074161 to 13074164 3 + TSS region transcription start site region 76353
Tssr76354 8 13074243 to 13074263 20 + TSS region transcription start site region 76354
Gm17023 8 13076065 to 13078954 2889 + antisense lncRNA gene predicted gene 17023
Pcid2 8 13077189 to 13105459 28270 - protein coding gene PCI domain containing 2
Tssr76355 8 13086448 to 13086456 8 + TSS region transcription start site region 76355
Gm17022 8 13086509 to 13087430 921 + pseudogene predicted gene 17022
Tssr80414 8 13090131 to 13090135 4 - TSS region transcription start site region 80414
Cpgi20108 8 13104321 to 13106717 2396 CpG island CpG island 20108
Tssr80415 8 13104815 to 13104839 24 - TSS region transcription start site region 80415
Tssr80416 8 13104959 to 13104990 31 - TSS region transcription start site region 80416
Tssr80417 8 13105353 to 13105376 23 - TSS region transcription start site region 80417
Tssr80418 8 13105431 to 13105484 53 - TSS region transcription start site region 80418
Tssr80419 8 13105485 to 13105508 23 - TSS region transcription start site region 80419
Tssr76356 8 13105618 to 13105627 9 + TSS region transcription start site region 76356
Cul4a 8 13105621 to 13147940 42319 + protein coding gene cullin 4A
Tssr76357 8 13105647 to 13105676 29 + TSS region transcription start site region 76357
Tssr76358 8 13105715 to 13105764 49 + TSS region transcription start site region 76358
Tssr76359 8 13105777 to 13105788 11 + TSS region transcription start site region 76359
4933411D12Rik 8 13120354 to 13121330 976 unclassified gene RIKEN cDNA 4933411D12 gene
Mir7065 8 13136072 to 13136132 60 + miRNA gene microRNA 7065
Tssr2496 8 13138661 to 13138668 7 + TSS region transcription start site region 2496
Tssr76360 8 13140062 to 13140081 19 + TSS region transcription start site region 76360
Tssr76361 8 13140128 to 13140149 21 + TSS region transcription start site region 76361
Cpgi20109 8 13158676 to 13160051 1375 CpG island CpG island 20109
Tssr76362 8 13159141 to 13159168 27 + TSS region transcription start site region 76362
Lamp1 8 13159161 to 13175338 16177 + protein coding gene lysosomal-associated membrane protein 1
Tssr76363 8 13159208 to 13159215 7 + TSS region transcription start site region 76363
Tssr76364 8 13159228 to 13159314 86 + TSS region transcription start site region 76364
Tssr76365 8 13159355 to 13159362 7 + TSS region transcription start site region 76365
Tssr76366 8 13159576 to 13159589 13 + TSS region transcription start site region 76366
Tssr76367 8 13165843 to 13165858 15 + TSS region transcription start site region 76367
Tssr76368 8 13165860 to 13165872 12 + TSS region transcription start site region 76368
Tssr76369 8 13165892 to 13165907 15 + TSS region transcription start site region 76369
Tssr76370 8 13165910 to 13165929 19 + TSS region transcription start site region 76370
Tssr76371 8 13165933 to 13165940 7 + TSS region transcription start site region 76371
Tssr76372 8 13167125 to 13167177 52 + TSS region transcription start site region 76372
Tssr76373 8 13167200 to 13167249 49 + TSS region transcription start site region 76373
Tssr76374 8 13167254 to 13167309 55 + TSS region transcription start site region 76374
Tssr76375 8 13167325 to 13167335 10 + TSS region transcription start site region 76375
Tssr76376 8 13167820 to 13167874 54 + TSS region transcription start site region 76376
Tssr80420 8 13167843 to 13167869 26 - TSS region transcription start site region 80420
Tssr76377 8 13167880 to 13167893 13 + TSS region transcription start site region 76377
Tssr80421 8 13167887 to 13167916 29 - TSS region transcription start site region 80421
Tssr76378 8 13167899 to 13167927 28 + TSS region transcription start site region 76378
Tssr76379 8 13171199 to 13171212 13 + TSS region transcription start site region 76379
Tssr76380 8 13171220 to 13171267 47 + TSS region transcription start site region 76380
Tssr80422 8 13171228 to 13171250 22 - TSS region transcription start site region 80422
Tssr80423 8 13171254 to 13171291 37 - TSS region transcription start site region 80423
Tssr76381 8 13171332 to 13171341 9 + TSS region transcription start site region 76381
Tssr76382 8 13172583 to 13172599 16 + TSS region transcription start site region 76382
Tssr76383 8 13173619 to 13173669 50 + TSS region transcription start site region 76383
Tssr76384 8 13173869 to 13173895 26 + TSS region transcription start site region 76384
Tssr76385 8 13174582 to 13174606 24 + TSS region transcription start site region 76385
Tssr80424 8 13175327 to 13175337 10 - TSS region transcription start site region 80424
Grtp1 8 13176869 to 13200652 23783 - protein coding gene GH regulated TBC protein 1
Mir1968 8 13189031 to 13189098 67 - miRNA gene microRNA 1968
Tssr80425 8 13192288 to 13192336 48 - TSS region transcription start site region 80425
Tssr2497 8 13192354 to 13192359 5 - TSS region transcription start site region 2497
Tssr80426 8 13192362 to 13192366 4 - TSS region transcription start site region 80426
Tssr80427 8 13198142 to 13198145 3 - TSS region transcription start site region 80427
Cpgi20110 8 13199754 to 13201434 1680 CpG island CpG island 20110
Tssr80428 8 13200576 to 13200636 60 - TSS region transcription start site region 80428
Tssr76386 8 13200776 to 13200787 11 + TSS region transcription start site region 76386
Tssr76387 8 13200946 to 13200971 25 + TSS region transcription start site region 76387
Gm34505 8 13201168 to 13214598 13430 - lncRNA gene predicted gene, 34505
2810030D12Rik 8 13201171 to 13201793 622 + bidirectional promoter lncRNA gene RIKEN cDNA 2810030D12 gene
Tssr80429 8 13201413 to 13201428 15 - TSS region transcription start site region 80429
Adprhl1 8 13221663 to 13254162 32499 - protein coding gene ADP-ribosylhydrolase like 1
Tssr80430 8 13254032 to 13254043 11 - TSS region transcription start site region 80430
Tssr80431 8 13254068 to 13254085 17 - TSS region transcription start site region 80431
Tssr80432 8 13254104 to 13254119 15 - TSS region transcription start site region 80432
Tssr80433 8 13254121 to 13254150 29 - TSS region transcription start site region 80433
Tssr80434 8 13254154 to 13254168 14 - TSS region transcription start site region 80434
Tssr80435 8 13254176 to 13254188 12 - TSS region transcription start site region 80435
Tssr80436 8 13254246 to 13254269 23 - TSS region transcription start site region 80436
Dcun1d2 8 13255963 to 13288126 32163 - protein coding gene DCN1, defective in cullin neddylation 1, domain containing 2 (S. cerevisiae)
E330037G11Rik 8 13264102 to 13265187 1085 - unclassified gene RIKEN cDNA E330037G11 gene
Gm25014 8 13283115 to 13283217 102 - snRNA gene predicted gene, 25014
9530085L11Rik 8 13285352 to 13287466 2114 - unclassified gene RIKEN cDNA 9530085L11 gene
Cpgi20111 8 13287078 to 13288513 1435 CpG island CpG island 20111
Tssr80437 8 13287814 to 13287856 42 - TSS region transcription start site region 80437
Tssr76388 8 13287887 to 13287929 42 + TSS region transcription start site region 76388