Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 8:12777112-12957116

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40 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Atp11a 8 12757016 to 12868728 111712 + protein coding gene ATPase, class VI, type 11A
Tssr80410 8 12779619 to 12779623 4 - TSS region transcription start site region 80410
Tssr76293 8 12826193 to 12826215 22 + TSS region transcription start site region 76293
Gm15350 8 12828338 to 12831919 3581 - antisense lncRNA gene predicted gene 15350
Tssr80411 8 12831909 to 12831927 18 - TSS region transcription start site region 80411
Tssr76294 8 12842843 to 12842886 43 + TSS region transcription start site region 76294
Gm15347 8 12860358 to 12877344 16986 - antisense lncRNA gene predicted gene 15347
Tssr76295 8 12866646 to 12866661 15 + TSS region transcription start site region 76295
Tssr76296 8 12867112 to 12867116 4 + TSS region transcription start site region 76296
Gm33637 8 12872344 to 12873542 1198 - lncRNA gene predicted gene, 33637
Mcf2l 8 12873544 to 13020509 146965 + protein coding gene mcf.2 transforming sequence-like
Cpgi20105 8 12873784 to 12874279 495 CpG island CpG island 20105
Tssr76297 8 12873793 to 12873826 33 + TSS region transcription start site region 76297
Tssr76298 8 12873902 to 12873929 27 + TSS region transcription start site region 76298
Gm15353 8 12879878 to 12883726 3848 - antisense lncRNA gene predicted gene 15353
Gm15351 8 12912713 to 12915427 2714 - antisense lncRNA gene predicted gene 15351
Cpgi20106 8 12915236 to 12915942 706 CpG island CpG island 20106
Tssr76299 8 12915677 to 12915690 13 + TSS region transcription start site region 76299
Tssr80412 8 12915733 to 12915778 45 - TSS region transcription start site region 80412
Tssr76300 8 12915879 to 12915966 87 + TSS region transcription start site region 76300
Tssr76301 8 12926192 to 12926201 9 + TSS region transcription start site region 76301
Tssr76302 8 12926204 to 12926218 14 + TSS region transcription start site region 76302
Tssr76303 8 12926268 to 12926291 23 + TSS region transcription start site region 76303
Tssr76304 8 12926299 to 12926317 18 + TSS region transcription start site region 76304
Tssr76305 8 12931672 to 12931711 39 + TSS region transcription start site region 76305
Tssr76306 8 12931718 to 12931750 32 + TSS region transcription start site region 76306
Tssr76307 8 12940928 to 12940945 17 + TSS region transcription start site region 76307
Cpgi20107 8 12947828 to 12948105 277 CpG island CpG island 20107
Tssr76308 8 12947865 to 12947931 66 + TSS region transcription start site region 76308
Tssr76309 8 12947935 to 12947962 27 + TSS region transcription start site region 76309
Gm38671 8 12947941 to 12948070 129 + miRNA gene predicted gene, 38671
Tssr76310 8 12947965 to 12947976 11 + TSS region transcription start site region 76310
Tssr76311 8 12947981 to 12948010 29 + TSS region transcription start site region 76311
Tssr76312 8 12949372 to 12949383 11 + TSS region transcription start site region 76312
Tssr76313 8 12949416 to 12949428 12 + TSS region transcription start site region 76313
Tssr76314 8 12949430 to 12949469 39 + TSS region transcription start site region 76314
Tssr76315 8 12949480 to 12949491 11 + TSS region transcription start site region 76315
Tssr76316 8 12949494 to 12949510 16 + TSS region transcription start site region 76316
Tssr76317 8 12949512 to 12949533 21 + TSS region transcription start site region 76317
Tssr76318 8 12951231 to 12951246 15 + TSS region transcription start site region 76318