Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 8:127141050-128465735

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61 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Pard3 8 127063893 to 127612286 548393 + protein coding gene par-3 family cell polarity regulator
Tssr80134 8 127171391 to 127171407 16 + TSS region transcription start site region 80134
Tssr80135 8 127179035 to 127179039 4 + TSS region transcription start site region 80135
3110037L02Rik 8 127194943 to 127196470 1527 unclassified gene RIKEN cDNA 3110037L02 gene
D8Mit326 8 127225696 to 127225818 122 DNA segment DNA Segment, Chr 8, Massachusetts Institute of Technology 326
Tssr80136 8 127234051 to 127234062 11 + TSS region transcription start site region 80136
Tssr80137 8 127234161 to 127234246 85 + TSS region transcription start site region 80137
D8Mit93 8 127242895 to 127243063 168 DNA segment DNA segment, Chr 8, Massachusetts Institute of Technology 93
Tssr80138 8 127268980 to 127268984 4 + TSS region transcription start site region 80138
Cpgi21311 8 127296032 to 127296291 259 CpG island CpG island 21311
Tssr2741 8 127379106 to 127379114 8 + TSS region transcription start site region 2741
Gm9909 8 127434872 to 127454244 19372 - lncRNA gene predicted gene 9909
Tssr83540 8 127440139 to 127440140 1 - TSS region transcription start site region 83540
Tssr83541 8 127440268 to 127440285 17 - TSS region transcription start site region 83541
Tssr83542 8 127441175 to 127441187 12 - TSS region transcription start site region 83542
Tssr83543 8 127441191 to 127441227 36 - TSS region transcription start site region 83543
Tssr80139 8 127447669 to 127447678 9 + TSS region transcription start site region 80139
Tssr80140 8 127485202 to 127485207 5 + TSS region transcription start site region 80140
Tssr80141 8 127521196 to 127521201 5 + TSS region transcription start site region 80141
Tssr80142 8 127540715 to 127540718 3 + TSS region transcription start site region 80142
Tssr80143 8 127546180 to 127546185 5 + TSS region transcription start site region 80143
Gm6921 8 127561435 to 127561869 434 + pseudogene predicted pseudogene 6921
Tssr80144 8 127579692 to 127579710 18 + TSS region transcription start site region 80144
Gm22968 8 127597706 to 127597823 117 + rRNA gene predicted gene, 22968
Cpgi21312 8 127602930 to 127603295 365 CpG island CpG island 21312
Gm32478 8 127630400 to 127639705 9305 + lncRNA gene predicted gene, 32478
Gm32532 8 127677066 to 127690808 13742 - lncRNA gene predicted gene, 32532
Edlmmq7 8 127755016 to 127755016 0 QTL extensor digitorum longus muscle mass QTL 7
Gmmq6 8 127755016 to 127755016 0 QTL gastrocnemius muscle mass QTL 6
Gm32590 8 127801062 to 127805735 4673 - lncRNA gene predicted gene, 32590
Tssr2742 8 127844600 to 127844602 2 + TSS region transcription start site region 2742
Tssr80145 8 128148759 to 128148775 16 + TSS region transcription start site region 80145
Tssr80146 8 128148779 to 128148795 16 + TSS region transcription start site region 80146
Tssr80147 8 128166386 to 128166396 10 + TSS region transcription start site region 80147
Tssr80148 8 128166409 to 128166437 28 + TSS region transcription start site region 80148
Tssr80149 8 128166449 to 128166454 5 + TSS region transcription start site region 80149
A930035F09Rik 8 128204713 to 128357716 153003 - lncRNA gene RIKEN cDNA A930035F09 gene
D8Mit1004 8 128205704 to 128205921 217 DNA segment DNA segment, Chr 8, Massachusetts Institute of Technology 1004
Mir21c 8 128278148 to 128278225 77 - miRNA gene microRNA 21c
Cpgi21313 8 128356963 to 128357644 681 CpG island CpG island 21313
Tssr80150 8 128357499 to 128357513 14 + TSS region transcription start site region 80150
Cpgi21314 8 128357898 to 128360110 2212 CpG island CpG island 21314
Tssr80151 8 128358567 to 128358581 14 + TSS region transcription start site region 80151
Tssr80152 8 128358584 to 128358666 82 + TSS region transcription start site region 80152
Nrp1 8 128358604 to 128503363 144759 + protein coding gene neuropilin 1
Tssr80153 8 128359032 to 128359045 13 + TSS region transcription start site region 80153
Tssr80154 8 128359065 to 128359085 20 + TSS region transcription start site region 80154
Tssr80155 8 128359089 to 128359102 13 + TSS region transcription start site region 80155
Tssr2743 8 128359169 to 128359181 12 + TSS region transcription start site region 2743
Mir1903 8 128359241 to 128359320 79 + miRNA gene microRNA 1903
Tssr80156 8 128359242 to 128359291 49 + TSS region transcription start site region 80156
Tssr80157 8 128359324 to 128359344 20 + TSS region transcription start site region 80157
Tssr80158 8 128359358 to 128359369 11 + TSS region transcription start site region 80158
Tssr80159 8 128359385 to 128359406 21 + TSS region transcription start site region 80159
Tssr80160 8 128375003 to 128375016 13 + TSS region transcription start site region 80160
Tssr80161 8 128418117 to 128418125 8 + TSS region transcription start site region 80161
Tssr80162 8 128418762 to 128418782 20 + TSS region transcription start site region 80162
Tssr2744 8 128418811 to 128418836 25 + TSS region transcription start site region 2744
D030005H02Rik 8 128437703 to 128443615 5912 unclassified gene RIKEN cDNA D030005H02 gene
Tssr83544 8 128438329 to 128438333 4 - TSS region transcription start site region 83544
Gm32643 8 128453055 to 128491976 38921 - lncRNA gene predicted gene, 32643