Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 8:126359827-126829853

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79 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Slc35f3 8 126298558 to 126395482 96924 + protein coding gene solute carrier family 35, member F3
Cpgi21300 8 126422173 to 126423033 860 CpG island CpG island 21300
Tssr80096 8 126422478 to 126422514 36 + TSS region transcription start site region 80096
Coa6 8 126422515 to 126425433 2918 + protein coding gene cytochrome c oxidase assembly factor 6
Tssr80097 8 126422520 to 126422559 39 + TSS region transcription start site region 80097
Tssr80098 8 126422561 to 126422575 14 + TSS region transcription start site region 80098
Tarbp1 8 126425329 to 126475065 49736 - protein coding gene TAR RNA binding protein 1
Cpgi21301 8 126473909 to 126475292 1383 CpG island CpG island 21301
Tssr83480 8 126475062 to 126475097 35 - TSS region transcription start site region 83480
Gm6091 8 126476248 to 126476412 164 - pseudogene predicted pseudogene 6091
Cpgi21302 8 126476584 to 126476872 288 CpG island CpG island 21302
Cpgi21303 8 126500996 to 126501236 240 CpG island CpG island 21303
5031438A03Rik 8 126518515 to 126519547 1032 unclassified non-coding RNA gene RIKEN cDNA 5031438A03 gene
D8Mit52 8 126534123 to 126534350 227 DNA segment DNA segment, Chr 8, Massachusetts Institute of Technology 52
Tssr83481 8 126537353 to 126537387 34 - TSS region transcription start site region 83481
D8Mit42 8 126552317 to 126552465 148 DNA segment DNA segment, Chr 8, Massachusetts Institute of Technology 42
Tssr80099 8 126556687 to 126556691 4 + TSS region transcription start site region 80099
Tssr80100 8 126566279 to 126566318 39 + TSS region transcription start site region 80100
Gm26759 8 126566970 to 126590988 24018 + antisense lncRNA gene predicted gene, 26759
Gm39286 8 126567112 to 126571925 4813 - lncRNA gene predicted gene, 39286
Tssr2738 8 126574747 to 126574750 3 - TSS region transcription start site region 2738
Cpgi21304 8 126583786 to 126585012 1226 CpG island CpG island 21304
Tssr83482 8 126584581 to 126584585 4 - TSS region transcription start site region 83482
Tssr83483 8 126585687 to 126585714 27 - TSS region transcription start site region 83483
Irf2bp2 8 126588296 to 126593436 5140 - protein coding gene interferon regulatory factor 2 binding protein 2
Tssr83484 8 126588478 to 126588489 11 - TSS region transcription start site region 83484
Tssr83485 8 126588647 to 126588655 8 - TSS region transcription start site region 83485
Tssr83486 8 126588674 to 126588692 18 - TSS region transcription start site region 83486
Tssr83487 8 126589451 to 126589467 16 - TSS region transcription start site region 83487
Tssr83488 8 126589536 to 126589570 34 - TSS region transcription start site region 83488
Tssr83489 8 126589587 to 126589607 20 - TSS region transcription start site region 83489
Tssr83490 8 126589612 to 126589626 14 - TSS region transcription start site region 83490
Tssr83491 8 126589708 to 126589726 18 - TSS region transcription start site region 83491
Tssr83492 8 126589776 to 126589787 11 - TSS region transcription start site region 83492
Tssr83493 8 126589889 to 126589904 15 - TSS region transcription start site region 83493
Tssr80101 8 126589942 to 126589958 16 + TSS region transcription start site region 80101
Tssr83494 8 126590057 to 126590104 47 - TSS region transcription start site region 83494
Tssr83495 8 126590449 to 126590469 20 - TSS region transcription start site region 83495
Tssr83496 8 126590744 to 126590769 25 - TSS region transcription start site region 83496
Tssr83497 8 126590989 to 126591001 12 - TSS region transcription start site region 83497
Tssr83498 8 126591492 to 126591520 28 - TSS region transcription start site region 83498
Tssr83499 8 126591634 to 126591645 11 - TSS region transcription start site region 83499
Tssr83500 8 126591648 to 126591672 24 - TSS region transcription start site region 83500
Tssr83501 8 126591703 to 126591740 37 - TSS region transcription start site region 83501
Tssr83502 8 126591766 to 126591784 18 - TSS region transcription start site region 83502
Tssr83503 8 126591914 to 126591926 12 - TSS region transcription start site region 83503
Tssr83504 8 126591985 to 126592000 15 - TSS region transcription start site region 83504
Cpgi21305 8 126592000 to 126595136 3136 CpG island CpG island 21305
Tssr83505 8 126592051 to 126592075 24 - TSS region transcription start site region 83505
Tssr83506 8 126592085 to 126592107 22 - TSS region transcription start site region 83506
Tssr80102 8 126592179 to 126592202 23 + TSS region transcription start site region 80102
Tssr83507 8 126592235 to 126592261 26 - TSS region transcription start site region 83507
Tssr80103 8 126592437 to 126592452 15 + TSS region transcription start site region 80103
Tssr83508 8 126593918 to 126593929 11 - TSS region transcription start site region 83508
Tssr83509 8 126593946 to 126593971 25 - TSS region transcription start site region 83509
Tssr83510 8 126593972 to 126593997 25 - TSS region transcription start site region 83510
Tssr83511 8 126594003 to 126594014 11 - TSS region transcription start site region 83511
Gm31546 8 126594265 to 126596168 1903 - lncRNA gene predicted gene, 31546
Tssr83512 8 126594562 to 126594568 6 - TSS region transcription start site region 83512
Tssr80104 8 126594693 to 126594712 19 + TSS region transcription start site region 80104
Tssr80105 8 126594793 to 126594822 29 + TSS region transcription start site region 80105
Tssr80106 8 126594827 to 126594853 26 + TSS region transcription start site region 80106
Tssr80107 8 126594895 to 126594917 22 + TSS region transcription start site region 80107
Tssr83513 8 126595946 to 126595983 37 - TSS region transcription start site region 83513
Tssr80108 8 126596216 to 126596221 5 + TSS region transcription start site region 80108
D8Mit122 8 126597988 to 126598127 139 DNA segment DNA segment, Chr 8, Massachusetts Institute of Technology 122
Tssr80109 8 126662927 to 126662965 38 + TSS region transcription start site region 80109
D8Mit92 8 126688333 to 126688492 159 DNA segment DNA segment, Chr 8, Massachusetts Institute of Technology 92
Fcd1 8 126688333 to 126688492 159 QTL functional capillary density 1
Leci1 8 126688333 to 126688492 159 QTL leukocyte endothelial cell interactions 1
Gm31603 8 126727940 to 126729750 1810 - lncRNA gene predicted gene, 31603
Tssr80110 8 126736825 to 126736863 38 + TSS region transcription start site region 80110
Gm45805 8 126755571 to 126758334 2763 - lincRNA gene predicted gene 45805
Tssr80111 8 126758177 to 126758190 13 + TSS region transcription start site region 80111
Tssr83514 8 126804167 to 126804175 8 - TSS region transcription start site region 83514
Tssr2739 8 126807464 to 126807470 6 - TSS region transcription start site region 2739
Gm31718 8 126812640 to 126908215 95575 - lincRNA gene predicted gene, 31718
Tssr83515 8 126817095 to 126817099 4 - TSS region transcription start site region 83515
Tssr80112 8 126828379 to 126828381 2 + TSS region transcription start site region 80112