Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 8:125870275-126030646

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28 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Pcnx2 8 125751508 to 125898317 146809 - protein coding gene pecanex homolog 2
Cpgi21289 8 125897896 to 125898512 616 CpG island CpG island 21289
Tssr83479 8 125898291 to 125898322 31 - TSS region transcription start site region 83479
A730098A19Rik 8 125900119 to 125907972 7853 + antisense lncRNA gene RIKEN cDNA A730098A19 gene
Cpgi21290 8 125909783 to 125911916 2133 CpG island CpG island 21290
Tssr80083 8 125910339 to 125910350 11 + TSS region transcription start site region 80083
Tssr80084 8 125910426 to 125910469 43 + TSS region transcription start site region 80084
Map3k21 8 125910450 to 125947440 36990 + protein coding gene mitogen-activated protein kinase kinase kinase 21
Tssr80085 8 125919142 to 125919149 7 + TSS region transcription start site region 80085
Cpgi21291 8 125934876 to 125935226 350 CpG island CpG island 21291
Cpgi21292 8 125950275 to 125950646 371 CpG island CpG island 21292
Gm31069 8 125956891 to 125957978 1087 + lncRNA gene predicted gene, 31069
Tssr80086 8 125960287 to 125960314 27 + TSS region transcription start site region 80086
Gm42056 8 125960438 to 125964686 4248 + lncRNA gene predicted gene, 42056
Cpgi21293 8 125995089 to 125996349 1260 CpG island CpG island 21293
Tssr80087 8 125995139 to 125995185 46 + TSS region transcription start site region 80087
Kcnk1 8 125995170 to 126030685 35515 + protein coding gene potassium channel, subfamily K, member 1
Tssr80088 8 125995341 to 125995346 5 + TSS region transcription start site region 80088
Tssr80089 8 125995375 to 125995404 29 + TSS region transcription start site region 80089
Tssr80090 8 125995407 to 125995473 66 + TSS region transcription start site region 80090
Cpgi21294 8 126007538 to 126007831 293 CpG island CpG island 21294
Cpgi21295 8 126024990 to 126025149 159 CpG island CpG island 21295
Gm45875 8 126029248 to 126046808 17560 - antisense lncRNA gene predicted gene 45875
Tssr80091 8 126029251 to 126029263 12 + TSS region transcription start site region 80091
Tssr80092 8 126029271 to 126029294 23 + TSS region transcription start site region 80092
Tssr2735 8 126029298 to 126029301 3 + TSS region transcription start site region 2735
Tssr80093 8 126029316 to 126029342 26 + TSS region transcription start site region 80093
Tssr2736 8 126029361 to 126029364 3 + TSS region transcription start site region 2736